PHMM can not work in somatic variants calling ?

[WinterLi1993]

HI ,
PHMM can not work in somatic variants calling ?

[mengyao]

Hi,

Thank you very much for your interests in PHMM.

Whether PHMM can do somatic variant calling depends on how would you like
to use it. PHMM takes bam file as input. Ideally, the reference genome for
somatic variant calling is a long contig sequenced and made from the
patients' own healthy tissue.

PHMM is not actively maintained currently. It is not a finished project.

Yours,

Mengyao

On Tue, Oct 18, 2016 at 7:34 PM, DoubleWinter [email protected]
wrote:

HI ,
PHMM can not work in somatic variants calling ?

—
You are receiving this because you are subscribed to this thread.
Reply to this email directly, view it on GitHub
#1, or mute the
thread
https://github.com/notifications/unsubscribe-auth/AAlVdImv1_dIZ3xmtJZh4Ll2gmT1OVq1ks5q1VeVgaJpZM4KaaBB
.

[WinterLi1993]

HI ,yao,
thank you for your answer!
may I ask are you a chinese ?

[mengyao]

Yes, I am.

Yours,

Mengyao

On Wed, Oct 19, 2016 at 12:24 AM, DoubleWinter [email protected]
wrote:

HI ,yao,
thank you for your answer!
may I ask are you a chinese ?

—
You are receiving this because you commented.
Reply to this email directly, view it on GitHub
#1 (comment),
or mute the thread
https://github.com/notifications/unsubscribe-auth/AAlVdLJ2JgXRBO6beSSdrgKPZIumFjJgks5q1ZtmgaJpZM4KaaBB
.

[WinterLi1993]

thank you for your answer!
I sent an e-mail to you .