From 40721dc238ac2534a85d4ed606ad4bcf85133f59 Mon Sep 17 00:00:00 2001 From: "Anna V. Anagnostopoulos" Date: Wed, 10 Jan 2024 08:59:20 -0500 Subject: [PATCH] Closes #3895 --- src/ontology/mp-edit.owl | 122 ++++++++++++++++++++++++++++++++++++++- 1 file changed, 119 insertions(+), 3 deletions(-) diff --git a/src/ontology/mp-edit.owl b/src/ontology/mp-edit.owl index 0fe59c66..f1b35737 100644 --- a/src/ontology/mp-edit.owl +++ b/src/ontology/mp-edit.owl @@ -14446,6 +14446,12 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -71781,6 +71787,7 @@ AnnotationAssertion(rdfs:comment "Do AnnotationAssertion(rdfs:label "aortic valve stenosis") SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (aortic valve prolapse) @@ -71935,6 +71942,7 @@ AnnotationAssertion(rdfs:comment "Do AnnotationAssertion(rdfs:label "pulmonary valve stenosis") SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (pulmonary valve prolapse) @@ -107297,6 +107305,7 @@ AnnotationAssertion( "MP:0010591") AnnotationAssertion(rdfs:label "enlarged aortic valve") SubClassOf( ) +SubClassOf( ) # Class: (abnormal atrioventricular septum morphology) @@ -107349,6 +107358,7 @@ AnnotationAssertion( "thick aortic valve") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) +SubClassOf( ) # Class: (abnormal aortic valve cusp morphology) @@ -107438,6 +107448,7 @@ AnnotationAssertion( "enlarged pulmonary valve") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) +SubClassOf( ) # Class: (thick pulmonary valve) @@ -107456,6 +107467,7 @@ AnnotationAssertion( "thick pulmonary valve") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) +SubClassOf( ) # Class: (abnormal pulmonary valve cusp morphology) @@ -186376,6 +186388,7 @@ AnnotationAssertion( "small pulmonary valve") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) +SubClassOf( ) # Class: (pulmonary valve hypoplasia) @@ -186394,8 +186407,8 @@ AnnotationAssertion( "MP:0031528") AnnotationAssertion(rdfs:label "pulmonary valve hypoplasia") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (pulmonary valve hyperplasia) @@ -186414,8 +186427,8 @@ AnnotationAssertion( "MP:0031529") AnnotationAssertion(rdfs:label "pulmonary valve hyperplasia") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (abnormal heart ventricle shape) @@ -186966,6 +186979,7 @@ AnnotationAssertion( "small aortic valve") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) +SubClassOf( ) # Class: (aortic valve hypoplasia) @@ -186984,6 +186998,7 @@ AnnotationAssertion( "aortic valve hypoplasia") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) +SubClassOf( ) # Class: (aortic valve hyperplasia) @@ -187002,6 +187017,7 @@ AnnotationAssertion( "aortic valve hyperplasia") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) +SubClassOf( ) # Class: (aortic valve hypertrophy) @@ -187098,7 +187114,7 @@ AnnotationAssertion( "MPheno.ontology") AnnotationAssertion( "MP:0031574") AnnotationAssertion(rdfs:label "thick atrioventricular valve") -EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) # Class: (atrioventricular valve stenosis) @@ -187181,6 +187197,106 @@ EquivalentClasses( ObjectSomeValuesFr SubClassOf( ) SubClassOf( ) +# Class: (enlarged semilunar valve) + +AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6490-7723") "an increase in the total area occupied by either one or both of the semilunar valves") +AnnotationAssertion( "2024-01-10T12:42:17Z"^^xsd:dateTime) +AnnotationAssertion( ) +AnnotationAssertion( "enlarged outflow tract valve") +AnnotationAssertion( "enlarged semi-lunar valve") +AnnotationAssertion( "increased outflow tract valve size") +AnnotationAssertion( "increased semi-lunar valve size") +AnnotationAssertion( "increased semilunar valve size") +AnnotationAssertion( "MPheno.ontology") +AnnotationAssertion( "MP:0031580") +AnnotationAssertion(rdfs:label "enlarged semilunar valve") +EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +SubClassOf( ) + +# Class: (semilunar valve hyperplasia) + +AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6490-7723") "increase in the number of normal cells in normal arrangement in either one or both of the semilunar valves, typically resulting in increased size") +AnnotationAssertion( "2024-01-10T12:51:02Z"^^xsd:dateTime) +AnnotationAssertion( ) +AnnotationAssertion( "hyperplastic outflow tract valve") +AnnotationAssertion( "hyperplastic semi-lunar valve") +AnnotationAssertion( "hyperplastic semilunar valve") +AnnotationAssertion( "outflow tract valve hyperplasia") +AnnotationAssertion( "semi-lunar valve hyperplasia") +AnnotationAssertion( "MPheno.ontology") +AnnotationAssertion( "MP:0031581") +AnnotationAssertion(rdfs:label "semilunar valve hyperplasia") +EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +SubClassOf( ) +SubClassOf( ) + +# Class: (small semilunar valve) + +AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6490-7723") "a decrease in the total area occupied by either one or both of the semilunar valves") +AnnotationAssertion( "2024-01-10T13:01:46Z"^^xsd:dateTime) +AnnotationAssertion( ) +AnnotationAssertion( "decreased semi-lunar valve size") +AnnotationAssertion( "decreased semilunar valve size") +AnnotationAssertion( "reduced semi-lunar valve size") +AnnotationAssertion( "reduced semilunar valve size") +AnnotationAssertion( "small outflow tract valve") +AnnotationAssertion( "small semi-lunar valve") +AnnotationAssertion( "MPheno.ontology") +AnnotationAssertion( "MP:0031582") +AnnotationAssertion(rdfs:label "small semilunar valve") +EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +SubClassOf( ) + +# Class: (semilunar valve hypoplasia) + +AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6490-7723") "decrease in the number of normal cells in normal arrangement in either one or both of the semilunar valves, typically resulting in decreased size") +AnnotationAssertion( "2024-01-10T13:18:37Z"^^xsd:dateTime) +AnnotationAssertion( ) +AnnotationAssertion( "hypoplastic outflow tract valve") +AnnotationAssertion( "hypoplastic semi-lunar valve") +AnnotationAssertion( "hypoplastic semilunar valve") +AnnotationAssertion( "outflow tract valve hypoplasia") +AnnotationAssertion( "semi-lunar valve hypoplasia") +AnnotationAssertion( "MPheno.ontology") +AnnotationAssertion( "MP:0031583") +AnnotationAssertion(rdfs:label "semilunar valve hypoplasia") +EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +SubClassOf( ) +SubClassOf( ) + +# Class: (thick semilunar valve) + +AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6490-7723") "an increase in the ratio of a semilunar valve wall thickness to its corresponding arterial wall thickness") +AnnotationAssertion( "2024-01-10T13:35:10Z"^^xsd:dateTime) +AnnotationAssertion( ) +AnnotationAssertion( "increased semi-lunar valve thickness") +AnnotationAssertion( "increased semilunar valve thickness") +AnnotationAssertion( "thick outflow tract valve") +AnnotationAssertion( "thick semi-lunar valve") +AnnotationAssertion( "thickened semi-lunar valve") +AnnotationAssertion( "thickened semilunar valve") +AnnotationAssertion( "MPheno.ontology") +AnnotationAssertion( "MP:0031584") +AnnotationAssertion(rdfs:label "thick semilunar valve") +EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +SubClassOf( ) + +# Class: (semilunar valve stenosis) + +AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6490-7723") "abnormal narrowing or constriction of either one or both of the semilunar valves") +AnnotationAssertion( "2024-01-10T13:48:38Z"^^xsd:dateTime) +AnnotationAssertion( ) +AnnotationAssertion( "outflow tract valve stenosis") +AnnotationAssertion( "semi-lunar valve stenosis") +AnnotationAssertion( "stenotic outflow tract valve") +AnnotationAssertion( "stenotic semi-lunar valve") +AnnotationAssertion( "stenotic semilunar valve") +AnnotationAssertion( "MPheno.ontology") +AnnotationAssertion( "MP:0031585") +AnnotationAssertion(rdfs:label "semilunar valve stenosis") +EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) +SubClassOf( ) + # Class: (abnormal gastrula morphology) AnnotationAssertion(Annotation( "http://discovery.lifemapsc.com/library/review-of-medical-embryology/chapter-18-week-3-of-development-trilaminar-germ-disk-embryo-formation-and-gastrulation") "any structural anomaly of the pear shaped trilaminar embryonic stage in which the primititve streak elongates, the epiblast cells migrate medially towards the streak, enter the primitive groove and migrate laterally to organize into the intraembryonic mesoderm (epithelio-mesenchymal transition) between the embryonic ectoderm and primitive endoderm; the notochordal process forms and extends, and the disc becomes pear shaped as the notochordal process grows")