RV.config

#!/bin/sh

#
# Program: RV.config
#
# Purpose:
#
#   Configuration file for Feature Relationship Vocabulary load
#

cd `dirname $0` 

RUNTIME_DIR="${DATALOADSOUTPUT}/mgi/vocload/runTimeRV"
ARCHIVE_DIR="${DATALOADSOUTPUT}/mgi/vocload/archiveRV"

export RUNTIME_DIR
export ARCHIVE_DIR

OBO_FILE="${DATALOADSOUTPUT}/mgi/rvload/input/RelationshipVocab.obo"
OBO_FILE_VERSION="1.2"
export OBO_FILE
export OBO_FILE_VERSION

# This variable will let the loadTerm module know that it should expect to
# find a synonym type column in the Termfile.
#
USE_SYNONYM_TYPE=1
export USE_SYNONYM_TYPE

RCD_FILE="RV.rcd"
export RCD_FILE

case `uname -n` in
bhmgiapp01) MAINTAINER="mgiadmin susan.bello@jax.org richard.baldarelli@jax.org";;
*) MAINTAINER="$USER";;
esac
export MAINTAINER

# vocabulary attributes:

VOCAB_NAME="Feature Relationship"    # name of vocabulary (VOC_Vocab.name) 
VOCAB_COMMENT_KEY=1001               # note type - private vocab term comment
ACC_PREFIX="RV"			     # acc ID prefix
JNUM=J:205981		#_Refs_key=207078
IS_SIMPLE=0		# structured vocabulary; should have a .rcd file
IS_PRIVATE=1		# acc IDs are NOT public
LOGICALDB_KEY=171	# ACC_LogicalDB._LogicalDB_key
ANNOT_TYPE_KEY=0        # VOC_AnnotType._AnnotType_key;don't report annotations
                        # newly obsoleted terms; there won't be any anyway
DAG_ROOT_ID="RV:0000000"

export VOCAB_NAME
export VOCAB_COMMENT_KEY
export ACC_PREFIX
export JNUM
export IS_SIMPLE
export IS_PRIVATE
export LOGICALDB_KEY
export ANNOT_TYPE_KEY
export DAG_ROOT_ID

TERM_FILE="${RUNTIME_DIR}/Termfile"
DEFS_FILE="${RUNTIME_DIR}/RV.defs"

export TERM_FILE
export DEFS_FILE