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MAINT: Update CIs #72

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10 changes: 10 additions & 0 deletions .github/dependabot.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,10 @@
version: 2
updates:
- package-ecosystem: "github-actions"
directory: "/"
schedule:
interval: "monthly"
groups:
actions:
patterns:
- "*"
6 changes: 6 additions & 0 deletions .github/release.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,6 @@
changelog:
exclude:
authors:
- dependabot
- pre-commit-ci
- github-actions
49 changes: 49 additions & 0 deletions .github/workflows/release.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,49 @@
# Upload a Python Package using Twine when a release is created

name: Build
on: # yamllint disable-line rule:truthy
release:
types: [published]
push:
branches: ["main", "maint/*"]
pull_request:
branches: ["main", "maint/*"]

permissions:
contents: read

jobs:
package:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v5
with:
python-version: '3.10'
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install build twine
- run: python -m build --sdist --wheel
- run: twine check --strict dist/*
- uses: actions/upload-artifact@v4
with:
name: dist
path: dist

pypi-upload:
needs: package
runs-on: ubuntu-latest
if: github.event_name == 'release'
permissions:
id-token: write # for trusted publishing
environment:
name: pypi
url: https://pypi.org/p/mne
steps:
- uses: actions/download-artifact@v4
with:
name: dist
path: dist
- uses: pypa/gh-action-pypi-publish@release/v1
if: github.event_name == 'release'
19 changes: 19 additions & 0 deletions .github/workflows/tests.yml
Original file line number Diff line number Diff line change
@@ -46,7 +46,26 @@ jobs:
- uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python }}
- run: pip install --upgrade pip setuptools
# TODO: shouldn't need to install NumPy first or pin it (distutils gone in 2.0), bad build reqs
- run: pip install --upgrade "numpy<2" s3cmd mne scikit-learn nose pytest pytest-cov "mne<0.24" nibabel
# TODO: Relax this pin
# TODO: Remove nose dependency
- run: pip install --no-build-isolation -ve .
- run: openssl aes-256-cbc -K "${{ secrets.encrypted_73bd2a498087_key }}" -iv "${{ secrets.encrypted_73bd2a498087_iv }}" -in .s3cfg.enc -out ~/.s3cfg -d
- run: python -c "from pathlib import Path; assert (Path('~').expanduser() / '.s3cfg').is_file()"
- run: mkdir ~/mne-hcp-data
- run: s3cmd get s3://mne-hcp-testing-data/mne-hcp-testing.tar.gz ~/mne-hcp-data/
- run: cd ~/mne-hcp-data/ && tar -xvzf mne-hcp-testing.tar.gz
- run: find ~/mne-hcp-data/mne-hcp-testing/105923 -name "*" > output.txt && cat output.txt | wc -l && head output.txt
- run: mkdir -p "${{ env.SUBJECTS_DIR}}" && python -c "import mne; mne.datasets.fetch_fsaverage(subjects_dir='${{ env.SUBJECTS_DIR }}')"
# TODO: Move this to the top (toward bottom to speed up testing of steps above)
- uses: pyvista/setup-headless-display-action@main
with:
qt: true
pyvista: false
- run: pytest -rfEXs --cov-report= --tb=short --durations 30 -v --cov=hcp --cov-report xml hcp
- uses: codecov/codecov-action@v4
with:
token: ${{ secrets.CODECOV_TOKEN }}
if: success()