setslicpath.m

function setslicpath(cvsroot)
% SETSLICPATH(cvsroot)
% This function add all the paths of the SLIC library using addpath command
% ---this version abbreviated for use with protoplast data---
%
% Input:
%   cvsroot: the root directory of the SLIC
%
% Output:
%   None
%
%   Usage example:	setcvspath('SLIC');

% Copyright (C) 2006, 2010  Murphy Lab
% Carnegie Mellon University
%
% This program is free software; you can redistribute it and/or modify
% it under the terms of the GNU General Public License as published
% by the Free Software Foundation; either version 2 of the License,
% or (at your option) any later version.
%
% This program is distributed in the hope that it will be useful, but
% WITHOUT ANY WARRANTY; without even the implied warranty of
% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
% General Public License for more details.
%
% You should have received a copy of the GNU General Public License
% along with this program; if not, write to the Free Software
% Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA
% 02110-1301, USA.
%
% For additional information visit http://murphylab.web.cmu.edu or
% send email to murphy@cmu.edu


if cvsroot(1) ~= '/'
    error('Please input full path.');
end

    addpath([cvsroot '/3D/matlab']);
    addpath([cvsroot '/3D/matlab/mex']);
%    addpath([cvsroot '/classify/matlab']);
%    addpath([cvsroot '/classify/svm_v0.54']);
%    addpath([cvsroot '/classify/netlab/matlab']);
%    if exist([cvsroot '/classify/libsvm'],'dir')
%        addpath([cvsroot '/classify/libsvm']);
%    end
%    addpath([cvsroot '/clustering/matlab']);
%    addpath([cvsroot '/featcalc/matlab']);
%    addpath([cvsroot '/featcalc/matlab/mex']);
%    addpath([cvsroot '/input/matlab']);
%    addpath([cvsroot '/input/matlab/mex']);
%    addpath([cvsroot '/misc']);
    addpath([cvsroot '/preprocess/matlab']);
%    addpath([cvsroot '/SDA/matlab']);
%    addpath([cvsroot '/segment/matlab']);
%    addpath([cvsroot '/SImEC/matlab']);
%    addpath([cvsroot '/TypIC/matlab']);
%    addpath([cvsroot '/TypIC/matlab/mex']);
%    addpath([cvsroot '/genmodel/matlab']);
%    addpath([cvsroot '/genmodel/matlab/mex']);
%    addpath([cvsroot '/genmodel/mixture']);
end