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This would require that one directly touches the code at https://github.com/pangenome/smoothxg. The idea would be to enable compilation for different SIMD instruction sets and connect these via a bash script as in https://github.com/pangenome/odgi/blob/master/scripts/generate_release.sh.
Additionally in smoothxg one has to set specific SIMD flags for the SPOA and abPOA dependencies.
This could speedup calculations by several times for free!
The text was updated successfully, but these errors were encountered:
Description of feature
This would require that one directly touches the code at https://github.com/pangenome/smoothxg. The idea would be to enable compilation for different SIMD instruction sets and connect these via a bash script as in https://github.com/pangenome/odgi/blob/master/scripts/generate_release.sh.
Additionally in
smoothxg
one has to set specific SIMD flags for the SPOA and abPOA dependencies.This could speedup calculations by several times for free!
The text was updated successfully, but these errors were encountered: