diff --git a/.github/workflows/update_components_template.yml b/.github/workflows/update_components_template.yml
deleted file mode 100644
index 575065d38..000000000
--- a/.github/workflows/update_components_template.yml
+++ /dev/null
@@ -1,46 +0,0 @@
-name: Update Modules Template
-
-on:
-  schedule:
-    - cron: "0 0 * * *"
-  workflow_dispatch:
-
-jobs:
-  update_modules:
-    runs-on: ubuntu-latest
-
-    steps:
-      - name: Checkout repository
-        uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4
-
-      - name: Set up Python
-        uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5
-        with:
-          python-version: "3.x"
-
-      - name: Install nf-core
-        run: pip install nf-core
-
-      - name: Update modules
-        run: nf-core modules update --all --no-preview
-        working-directory: nf_core/pipeline-template
-
-      - name: Update subworkflows
-        run: nf-core subworkflows update --all --no-preview
-        working-directory: nf_core/pipeline-template
-
-      # Commit the changes
-      - name: Commit changes
-        run: |
-          git config user.email "core@nf-co.re"
-          git config user.name "nf-core-bot"
-          git add .
-          git status
-          git commit -m "[automated] Fix code linting"
-
-      # Open a new PR to dev with the changes
-      - name: Create PR
-        run: |
-          git checkout -b update-modules
-          git push origin update-modules
-          gh pr create --title "Update modules in template" --body "This PR updates the modules in the pipeline template" --base dev --head update-modules