From 2aefdfdfa9243a8aadadbe3882d8180e8a2216ae Mon Sep 17 00:00:00 2001 From: bpinsard Date: Wed, 20 Mar 2024 14:31:35 -0400 Subject: [PATCH] backport fix copy of dseg.tsv following templateflow update to LTS --- fmriprep/cli/run.py | 10 +++++++++- 1 file changed, 9 insertions(+), 1 deletion(-) diff --git a/fmriprep/cli/run.py b/fmriprep/cli/run.py index f094e4d28..8b8eb242c 100755 --- a/fmriprep/cli/run.py +++ b/fmriprep/cli/run.py @@ -160,7 +160,15 @@ def main(): from templateflow import api from niworkflows.utils.misc import _copy_any - dseg_tsv = str(api.get("fsaverage", suffix="dseg", extension=[".tsv"])) + dseg_tsv = str( + api.get( + "fsaverage", + hemi=None, + atlas=None, + suffix="dseg", + extension=[".tsv"] + ) + ) _copy_any( dseg_tsv, str(config.execution.fmriprep_dir / "desc-aseg_dseg.tsv") )