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Running the new bids-validator I get more warnings than with the older one.
eg
[WARNING] JSON_KEY_RECOMMENDED A JSON file is missing a key listed as recommended.
DatasetType
/dataset_description.json
GeneratedBy
/dataset_description.json
SourceDatasets
/dataset_description.json
So we should maybe improve the currently generated dataset_description.json to include such tags.
It also get errors such as
[ERROR] SIDECAR_KEY_REQUIRED A data file's JSON sidecar is missing a key listed as required.
Units
/sub-participant/ses-43/anat/sub-participant_ses-43_acq-stagefa5_echo-1_part-phase_MEGRE.nii.gz
/sub-participant/ses-43/anat/sub-participant_ses-43_acq-stagefa5_echo-2_part-phase_MEGRE.nii.gz
So it seems that all part-phase should have Units defined in the json, in most cases this would be arbitrary.
As heudiconv can set part-phase after dcm2niix in update_complex_name, it should be done in heudiconv.
Platform details:
Choose one:
Local environment
Container
Heudiconv version:
1.3.2
The text was updated successfully, but these errors were encountered:
Summary
Running the new bids-validator I get more warnings than with the older one.
eg
So we should maybe improve the currently generated
dataset_description.json
to include such tags.It also get errors such as
So it seems that all
part-phase
should haveUnits
defined in the json, in most cases this would bearbitrary
.As heudiconv can set
part-phase
afterdcm2niix
inupdate_complex_name
, it should be done in heudiconv.Platform details:
Choose one:
1.3.2
The text was updated successfully, but these errors were encountered: