Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

RDF ontology? #507

Open
rmfranken opened this issue Jul 1, 2024 · 3 comments
Open

RDF ontology? #507

rmfranken opened this issue Jul 1, 2024 · 3 comments
Labels
request any request or update for schemas

Comments

@rmfranken
Copy link

Hi there,

I'm interested in reusing your work, mainly your core schemas. I saw that you are using some json-LD for your instances, but how about your schema? Do you have an ontology defined in an RDF serialization somewhere with URI's for each object and property that can be resolved and reused by others?

Kind regards,
Robin

@lzehl
Copy link
Member

lzehl commented Jul 4, 2024

@rmfranken Hi Robin. Great to hear that you want to reuse our work :) we develop our schemas currently in a customized syntax we defined for this project. We defined our own syntax to simplify the schemas but also to be able to integrate technical hints/instructions for the adoption of those schemas into graph database systems.

However we are translating (the parts that are possible to translate) into the following commonly known schema formats: JSON-Schema, LinkML.
Be aware that both target formats are not well tested at that moment. We are happy though to receive feedback and improve the translation.

In addition we also provide the schemas as classes in MATLAB, Python, Java. The Python library is most likely the best tested one at that moment.

Please let us know if you have further questions.

@rmfranken rmfranken closed this as not planned Won't fix, can't repro, duplicate, stale Jul 17, 2024
@apdavison
Copy link
Member

Note that OWL can be generated from a LinkML schema (see https://linkml.io/linkml/data/rdf.html), so this might be worth pursuing.

As for a direct RDFS representation of the openMINDS schemas, this is something I'd like us to do, but I don't know when any of the current developers will have time.

@apdavison apdavison reopened this Jul 17, 2024
@lzehl
Copy link
Member

lzehl commented Jan 20, 2025

@Raphael-Gazzotti would you like to follow up on this? (RDF as additional target format for openMINDS schemas)

@lzehl lzehl added the request any request or update for schemas label Jan 20, 2025
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
request any request or update for schemas
Projects
None yet
Development

No branches or pull requests

3 participants