Repositories list

• MultiQC

  Public
  Aggregate results from bioinformatics analyses across many samples into a single report.

  pythonbioinformaticsquality-control+ 8analysisreportingpypidata-visualizationbiocondamultiqcvizualisation+ 1

  JavaScript

  •

  GNU General Public License v3.0

  •604•1.2k•199•36•Updated Nov 18, 2024Nov 18, 2024

• MegaQC

  Public
  Web application to collect and visualise data across multiple MultiQC runs.

  Python

  •

  GNU General Public License v3.0

  •28•95•89•30•Updated Nov 18, 2024Nov 18, 2024

• website

  Public archive
  Website files for MultiQC

  websitemultiqc

  HTML

  •

  MIT License

  •1•2•0•0•Updated Nov 14, 2024Nov 14, 2024

• test-data

  Public
  Test data for MultiQC.

  bioinformaticsmultiqctest-data+ 1bioinformatics-data

  HTML

  •

  MIT License

  •145•20•0•11•Updated Nov 13, 2024Nov 13, 2024

• api.multiqc.info

  Public
  Code for basic MultiQC API service, providing run-time information about available updates.

  apimultiqc

  Python

  •

  MIT License

  •0•0•1•4•Updated Sep 18, 2024Sep 18, 2024

• example-plugin

  Public template
  A miniature example of a MultiQC plugin.

  pythonpluginquality-control+ 5ngsnext-generation-sequencingmultiqcexample-projectmultiqc-plugin

  Python

  •

  MIT License

  •6•8•0•1•Updated Jul 1, 2024Jul 1, 2024

• example-notebook

  Public
  Example of using MultiQC within a Jupyter Notebook

  HTML

  •

  MIT License

  •2•2•0•1•Updated May 29, 2024May 29, 2024

• example-streamlit

  Public
  Example of using MultiQC within a Streamlit app

  Python

  •1•0•0•0•Updated May 15, 2024May 15, 2024

• MegaQC_website

  Public
  Website files for MegaQC.

  SCSS

  •

  Other

  •1•1•2•0•Updated Dec 19, 2023Dec 19, 2023

• logo

  Public
  MultiQC logo and branding information

  logomultiqccolours+ 1branding

  0•0•0•0•Updated Dec 18, 2023Dec 18, 2023

• .github

  Public
  Apache License 2.0

  •0•0•0•0•Updated Oct 16, 2023Oct 16, 2023

• MultiQC_NGI

  Public
  MultiQC plugin for the National Genomics Infrastructure in Stockholm, Sweden.

  pythonbioinformaticsanalysis+ 1multiqc

  Python

  •

  MIT License

  •9•3•0•0•Updated Aug 4, 2023Aug 4, 2023

• MultiQC_SAV

  Public
  MultiQC plugin replicating the most used plots and tables from Illumina's SAV

  Python

  •

  MIT License

  •1•6•4•0•Updated Apr 4, 2022Apr 4, 2022

• custom_images_tsv

  Public
  Plugin to insert images in a MultiQC report

  Python

  •1•0•0•0•Updated Aug 23, 2021Aug 23, 2021

• MultiQC_bcbio

  Public
  MultiQC plugin for bcbio_nextgen pipeline

  Python

  •

  MIT License

  •5•9•0•0•Updated Oct 29, 2020Oct 29, 2020

• MultiQC_Clarity

  Public
  MultiQC plugin interacting with the Illumina Genologics Clarity LIMS

  bioinformaticslimssequencing+ 5next-generation-sequencingmultiqcilluminaclaritygenologics

  Python

  •

  MIT License

  •5•1•2•0•Updated Feb 14, 2019Feb 14, 2019

• OSXApp

  Public archive
  Files and config for OS X wrapper around MultiQC. See https://github.com/ewels/MultiQC

  Python

  •

  MIT License

  •0•0•0•0•Updated Mar 3, 2016Mar 3, 2016

• publication

  Public archive
  Source for paper describing MultiQC. See main repository here: https://github.com/ewels/MultiQC

  HTML

  •0•0•0•0•Updated Jan 5, 2016Jan 5, 2016