Repositories list

• RENDOR

  Public
  RENDOR method for removing indirect noise

  R

  •

  Other

  •0•3•0•0•Updated Jun 20, 2024Jun 20, 2024

• RENDOR-reproduce

  Public
  R

  •0•2•0•0•Updated May 23, 2024May 23, 2024

• SCARP

  Public
  Incorporating network diffusion and peak location information for better single-cell ATAC-seq data analysis

  HTML

  •

  MIT License

  •0•2•0•0•Updated Dec 20, 2023Dec 20, 2023

• SCARP-reproduce

  Public
  We have deposited all the necessary data and code required to reproduce the findings in SCARP stduy in this repository.

  Jupyter Notebook

  •0•0•0•0•Updated Nov 3, 2023Nov 3, 2023

• MOLI

  Public
  Link prediction using Multiple Order Local Information (MOLI)

  Python

  •0•0•0•0•Updated Apr 17, 2023Apr 17, 2023

• IPJGL

  Public
  Importance-Penalized Joint Graphical Lasso (IPJGL)

  R

  •0•2•0•0•Updated Apr 3, 2023Apr 3, 2023

• NR

  Public
  Network Refinement: Denoising complex networks for better community detection.

  R

  •0•1•0•0•Updated Mar 21, 2023Mar 21, 2023

• PathExpSurv

  Public
  Python

  •1•0•0•0•Updated Nov 9, 2022Nov 9, 2022

• SCARP_biorxiv

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Sep 4, 2022Sep 4, 2022

• IBTA

  Public
  R

  •0•2•0•0•Updated Jul 17, 2022Jul 17, 2022

• NR-arXiv

  Public
  Network Refinement: a tool for network denoising

  R

  •0•0•0•0•Updated Nov 22, 2021Nov 22, 2021

• BlockSim

  Public
  R package for Blockchain Simulation and Research Tools

  R

  •0•0•2•0•Updated Nov 30, 2019Nov 30, 2019

• HMC-DataProc

  Public archive
  Data process scripts for HMC experiments

  Python

  •0•0•0•0•Updated Aug 23, 2019Aug 23, 2019

• HMC

  Public archive
  Haplotyping tool based on Markov Chain

  C++

  •0•0•0•0•Updated Aug 23, 2019Aug 23, 2019

• Samo

  Public archive
  Protein structural alignment tool based on multiple objective optimization

  C++

  •0•0•0•0•Updated Aug 23, 2019Aug 23, 2019