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    11 repositories

    • cellarium-workflows

      Public
      Repository with example how to run workflows in Vertex AI
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Nov 16, 2024Nov 16, 2024

    • cellarium-ml

      Public
      Distributed single-cell data analysis.
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •3•22•42•12•Updated Nov 15, 2024Nov 15, 2024

    • cellarium-cloud

      Public
      Cellarium Cloud Core Library
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•5•27•1•Updated Nov 14, 2024Nov 14, 2024

    • cellarium-cas

      Public
      Python client libraries for Cellarium Cloud Cell Annotation Service (CAS).
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•2•9•1•Updated Oct 31, 2024Oct 31, 2024

    • CellMincer

      Public
      CellMincer is a software package for self-supervised denoising of voltage imaging datasets
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•4•6•2•Updated Jul 3, 2024Jul 3, 2024

    • cellarium-neu-challenge

      Public
      Jupyter Notebook
      •0•0•0•0•Updated May 26, 2024May 26, 2024

    • CellBender

      Public
      CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.
      0•0•0•0•Updated Feb 2, 2023Feb 2, 2023

    • anndata

      Public
      Annotated data.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •154•0•0•0•Updated Jan 31, 2023Jan 31, 2023

    • SynapseCLR

      Public
      A contrastive learning framework for 3D electron microscopy data
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •1•11•0•0•Updated Jan 17, 2023Jan 17, 2023

    • Optosynth

      Public
      Synthetic voltage image (Optopatch) data generator
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Apr 9, 2021Apr 9, 2021

    • MightyCodes

      Public
      MightyCodes is a software package for constructing optimal short codes for ultra-low-bandwidth communication systems.
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Mar 24, 2021Mar 24, 2021