Repositories list

• Preterm_birth_2023_code_repo

  Public
  R

  •0•0•0•0•Updated Jul 3, 2024Jul 3, 2024

• Laura_PhD_thesis_embryonic_polyIC

  Public
  This repositry contains the R and python scripts used to analyse the single-nuclei RNA sequencing data in the PHD thesis "" by Laura Wolbeck.

  Jupyter Notebook

  •0•0•0•0•Updated May 23, 2024May 23, 2024

• CRMetrics

  Public
  Summarization of CellRanger count metrics.

  R

  •1•5•5•0•Updated Mar 11, 2024Mar 11, 2024

• Preterm_project_2_code_repo

  Public
  This repository contains the analysis steps and code to generate the figures of the paper "xy". Helper functions used in the scripts are in scRNA_helper_functions_preterm_2.R.

  0•0•0•0•Updated Dec 8, 2023Dec 8, 2023

• Epilepsy19

  Public
  Analysis for the Epilepsy paper

  R

  •

  MIT License

  •4•7•0•0•Updated Mar 20, 2023Mar 20, 2023

• CellAnnotatoR

  Public
  Automated marker-based annotation of cell types

  R

  •4•13•0•0•Updated Aug 8, 2022Aug 8, 2022

• IReNA

  Public
  R package IReNA

  R

  •

  GNU General Public License v3.0

  •12•0•0•0•Updated May 31, 2022May 31, 2022

• Schizophrenia20

  Public
  HTML

  •0•2•1•0•Updated May 26, 2022May 26, 2022

• knowledge-base

  Public
  All lab work-related knowledge we gather (not code)

  single-cellsingle-cell-analysis

  1•1•0•0•Updated Apr 8, 2022Apr 8, 2022

• dataorganizer

  Public
  Organization of files inside the research project

  research-compendium

  R

  •

  Other

  •0•0•0•0•Updated Feb 10, 2022Feb 10, 2022

• CellTypeDistanceBenchmarks

  Public archive
  Some utils

  R

  •2•0•0•0•Updated Aug 11, 2021Aug 11, 2021