Open Problems in Single-Cell Analysis

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30 packages

predict_modality/control_methods/random_predict
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/predict_modality/control_methods/random_predict

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denoising/process_dataset
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/denoising/process_dataset

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match_modalities/control_methods/random_features
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/match_modalities/control_methods/random_features

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common/create_task_readme
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/common/create_task_readme

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batch_integration/metrics/kbet
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/batch_integration/metrics/kbet

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dimensionality_reduction/methods/lmds
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/dimensionality_reduction/methods/lmds

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denoising/control_methods/no_denoising
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/denoising/control_methods/no_denoising

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label_projection/control_methods/random_labels
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/label_projection/control_methods/random_labels

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spatial_decomposition/methods/rctd
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/spatial_decomposition/methods/rctd

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batch_integration/control_methods/random_integration/celltype_feature
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/batch_integration/control_methods/random_integration/celltype_feature

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denoising/methods/knn_smoothing
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/denoising/methods/knn_smoothing

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predict_modality/methods/knnr_py
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/predict_modality/methods/knnr_py

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label_projection/methods/knn
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/label_projection/methods/knn

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predict_modality/methods/guanlab_dengkw_pm
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/predict_modality/methods/guanlab_dengkw_pm

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dimensionality_reduction/metrics/distance_correlation
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/dimensionality_reduction/metrics/distance_correlation

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batch_integration/methods/combat
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/batch_integration/methods/combat

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batch_integration/metrics/isolated_label_asw
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/batch_integration/metrics/isolated_label_asw

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match_modalities/metrics/knn_auc
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/match_modalities/metrics/knn_auc

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batch_integration/control_methods/random_integration/global_graph
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/batch_integration/control_methods/random_integration/global_graph

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label_projection/methods/naive_bayes
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/label_projection/methods/naive_bayes

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batch_integration/methods/scanorama_embed
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/batch_integration/methods/scanorama_embed

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spatial_decomposition/control_methods/true_proportions
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/spatial_decomposition/control_methods/true_proportions

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batch_integration/methods/pyliger
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/batch_integration/methods/pyliger

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spatial_decomposition/methods/seurat
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/spatial_decomposition/methods/seurat

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spatial_decomposition/methods/nmfreg
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/spatial_decomposition/methods/nmfreg

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dimensionality_reduction/methods/phate
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/dimensionality_reduction/methods/phate

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spatially_variable_genes/process_dataset/simulate_svg
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/spatially_variable_genes/process_dataset/simulate_svg

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spatially_variable_genes/process_dataset/select_reference
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/spatially_variable_genes/process_dataset/select_reference

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spatial_decomposition/methods/vanillanmf
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/spatial_decomposition/methods/vanillanmf

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predict_modality/methods/simplemlp_train
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/predict_modality/methods/simplemlp_train

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