Open Problems in Single-Cell Analysis

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30 packages

custom
Published Sep 19, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/custom

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basic
Published Sep 19, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/basic

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normalize_by_volume
Published Sep 19, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/normalize_by_volume

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alpha_shapes
Published Sep 19, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/alpha_shapes

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ssam
Published Sep 19, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/ssam

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gene_efficiency_correction
Published Sep 19, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/gene_efficiency_correction

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basic_qc_filter
Published Sep 20, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/basic_qc_filter

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methods/custom
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/methods/custom

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methods/basic
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/methods/basic

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metrics/similarity_metrics
Published Sep 20, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/metrics/similarity_metrics

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methods/basic_qc_filter
Published Sep 22, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/methods/basic_qc_filter

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methods/alpha_shapes
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/methods/alpha_shapes

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methods/normalize_by_volume
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/methods/normalize_by_volume

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methods/ssam
Published Sep 22, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/methods/ssam

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methods/gene_efficiency_correction
Published Sep 22, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/methods/gene_efficiency_correction

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metrics_similarity/similarity_metrics
Published Sep 23, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/metrics_similarity/similarity_metrics

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methods_count_aggregation/basic
Published Sep 23, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/methods_count_aggregation/basic

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methods_segmentation/custom
Published Sep 23, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/methods_segmentation/custom

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methods_transcript_assignment/basic
Published Sep 23, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/methods_transcript_assignment/basic

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data_loaders/download_10x_xenium
Published Aug 30, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/data_loaders/download_10x_xenium

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cell_volume_methods/alpha_shapes
Published Sep 18, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/cell_volume_methods/alpha_shapes

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expr_correction_methods/gene_efficiency_correction
Published Sep 18, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/expr_correction_methods/gene_efficiency_correction

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normalisation_methods/normalise_by_volume
Published Sep 18, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/normalisation_methods/normalise_by_volume

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data_processors/crop_region
Published Aug 30, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/data_processors/crop_region

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assignment_methods/basic
Published Sep 2, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/assignment_methods/basic

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segmentation_methods/custom
Published Sep 2, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/segmentation_methods/custom

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data_processors/subset_reference
Published Aug 30, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/data_processors/subset_reference

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segmentation_methods/example
Published Aug 30, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/segmentation_methods/example

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data_loaders/download_allen_brain_cell_atlas
Published Aug 30, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/data_loaders/download_allen_brain_cell_atlas

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celltype_annotation_methods/ssam
Published Sep 18, 2024 by Open Problems in Single-Cell Analysis in task_ist_preprocessing/celltype_annotation_methods/ssam

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