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DESCRIPTION
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Package: alabaster.sfe
Type: Package
Title: Language agnostic on disk serialization of SpatialFeatureExperiment
Version: 0.99.2001
Authors@R:
person("Lambda", "Moses", email = "[email protected]",
role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-7092-9427"))
Description:
Builds upon the existing ArtifactDB project, expending alabaster.spatial for
language agnostic on disk serialization of SpatialFeatureExperiment.
Depends:
SpatialFeatureExperiment (>= 1.9.3),
alabaster.base
Imports:
alabaster.sce,
alabaster.spatial (>= 1.5.2),
EBImage,
jsonlite,
methods,
RBioFormats,
S4Vectors,
sfarrow,
SingleCellExperiment,
spdep,
SummarizedExperiment,
terra,
xml2
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.2
Suggests:
BiocStyle,
fs,
knitr,
rmarkdown,
scater,
sf,
SFEData,
testthat (>= 3.0.0),
Voyager (>= 1.9.1)
Config/testthat/edition: 3
VignetteBuilder: knitr
URL: https://pachterlab.github.io/alabaster.sfe/
biocViews:
DataRepresentation,
Spatial