no numpy module found although it is installed

[kdarras]

Hi there, thanks for the useful repo!

However, when I tried running the main_test_indices.py file after fetching the entire repo on Ubuntu 20.04 and making sure that all 4 required packages were installed with PIP and also APT, I was unsuccessful:

 python main_test_indices.py
Traceback (most recent call last):
  File "main_test_indices.py", line 16, in <module>
    from compute_indice import *
  File "/home/kdarras/Documents/Boulot/2020 Hangzhou/ecoSound-web/indices/Acoustic_Indices/compute_indice.py", line 23, in <module>
    from scipy import signal, fftpack
  File "/usr/lib/python3/dist-packages/scipy/__init__.py", line 62, in <module>
    from numpy import show_config as show_numpy_config
ImportError: No module named numpy

please advise whether this is a bug or an error on my part.

[estabenau]

I'm glad you are giving it a shot. That error indicates numpy isn't installed. If you can just try this from a command line, open python from inside the python she'll import numpy. If that fails it means you don't have numpy installed or at least not properly.. A quick Google search will find instructions to install numpy for your particular setup. As for the acoustic package, it remains a work in progress. I've had mixed results with some of the analysis so be cautious on interpretation. Good luck

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On Tue, Aug 3, 2021, 2:16 AM Kevin F.A. Darras ***@***.***> wrote: Hi there, thanks for the useful repo! However, when I tried running the main_test_indices.py file after fetching the entire repo on Ubuntu 20.04 and making sure that all 4 required packages were installed with PIP and also APT, I was unsuccessful: python main_test_indices.py Traceback (most recent call last): File "main_test_indices.py", line 16, in <module> from compute_indice import * File "/home/kdarras/Documents/Boulot/2020 Hangzhou/ecoSound-web/indices/Acoustic_Indices/compute_indice.py", line 23, in <module> from scipy import signal, fftpack File "/usr/lib/python3/dist-packages/scipy/__init__.py", line 62, in <module> from numpy import show_config as show_numpy_config ImportError: No module named numpy please advise whether this is a bug or an error on my part. — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#4>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ACTMJXPX2JIOE2DCS6NALH3T26CVPANCNFSM5BOEGMCA> . Triage notifications on the go with GitHub Mobile for iOS <https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675> or Android <https://play.google.com/store/apps/details?id=com.github.android&utm_campaign=notification-email> .

[kdarras]

Thanks a lot for checking this. Weird... I had the impression I installed all required packages with APT and PIP. Now that numpy has been (re-?) installed with APT, I got to the next error message, which looks a little different:

python main_test_indices.py
Traceback (most recent call last):
  File "main_test_indices.py", line 16, in <module>
    from compute_indice import *
  File "/home/kdarras/Documents/Boulot/2020 Hangzhou/ecoSound-web/indices/Acoustic_Indices/compute_indice.py", line 23, in <module>
    from scipy import signal, fftpack
  File "/usr/lib/python3/dist-packages/scipy/__init__.py", line 119, in <module>
    from scipy._lib._ccallback import LowLevelCallable
  File "/usr/lib/python3/dist-packages/scipy/_lib/_ccallback.py", line 1, in <module>
    from . import _ccallback_c
ImportError: cannot import name _ccallback_c

PS: scipy is installed
"python3-scipy is already the newest version (1.3.3-3build1)."