From 893f308bc11c25f94ccb4f47f7bf3aab5aa55f27 Mon Sep 17 00:00:00 2001
From: Jeffrey Hanson <jeffrey.hanson@uqconnect.edu.au>
Date: Mon, 18 Oct 2021 12:53:45 +1300
Subject: [PATCH] update ci tests

---
 .github/workflows/R-CMD-check-mac-osx.yaml |  1 +
 .github/workflows/R-CMD-check-ubuntu.yaml  | 17 +++++++++++------
 .github/workflows/R-CMD-check-windows.yaml |  1 +
 3 files changed, 13 insertions(+), 6 deletions(-)

diff --git a/.github/workflows/R-CMD-check-mac-osx.yaml b/.github/workflows/R-CMD-check-mac-osx.yaml
index 925068b..6e7a588 100644
--- a/.github/workflows/R-CMD-check-mac-osx.yaml
+++ b/.github/workflows/R-CMD-check-mac-osx.yaml
@@ -68,6 +68,7 @@ jobs:
 
       - name: Install dependencies
         run: |
+          options("install.packages.compile.from.source" = "never")
           remotes::install_deps(dependencies = TRUE)
           remotes::install_cran("rcmdcheck")
           remotes::install_cran("covr")
diff --git a/.github/workflows/R-CMD-check-ubuntu.yaml b/.github/workflows/R-CMD-check-ubuntu.yaml
index e0b130c..08ffced 100644
--- a/.github/workflows/R-CMD-check-ubuntu.yaml
+++ b/.github/workflows/R-CMD-check-ubuntu.yaml
@@ -18,14 +18,15 @@ jobs:
   R-CMD-check:
     runs-on: ${{ matrix.config.os }}
 
-    name: ${{ matrix.config.os }} (${{ matrix.config.r }})
+    name: ${{ matrix.config.os }} (${{ matrix.config.r }}) (${{ matrix.config.pkgs }} packages)
 
     strategy:
       fail-fast: false
       matrix:
         config:
-          - {os: ubuntu-20.04, r: 'release'}
-          - {os: ubuntu-20.04, r: 'devel'}
+          - {os: ubuntu-20.04, r: 'release', pkgs: 'all'}
+          - {os: ubuntu-20.04, r: 'devel', pkgs: 'all'}
+          - {os: ubuntu-20.04, r: 'devel', pkgs: 'depends only'}
 
     env:
       _R_REMOTES_NO_ERRORS_FROM_WARNINGS_: true
@@ -56,11 +57,10 @@ jobs:
         uses: actions/cache@v2
         with:
           path: ${{ env.R_LIBS_USER }}
-          key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
-          restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-
+          key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-cache-${{ hashFiles('.github/depends.Rds') }}
+          restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-cache-
 
       - name: Install system dependencies
-        if: runner.os == 'Linux'
         run: |
           sudo apt-get -y install libcurl4-openssl-dev
           while read -r cmd
@@ -82,6 +82,11 @@ jobs:
           sessioninfo::session_info(pkgs, include_base = TRUE)
         shell: Rscript {0}
 
+      - name: Set environmental variables for package checks
+        if: matrix.config.pkgs == 'depends only'
+        run: |
+          echo "_R_CHECK_DEPENDS_ONLY_=true" >> $GITHUB_ENV
+
       - name: Check
         run: |
           rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran", "--no-build-vignettes"), error_on = "warning", check_dir = "check")
diff --git a/.github/workflows/R-CMD-check-windows.yaml b/.github/workflows/R-CMD-check-windows.yaml
index 16b63bf..2b9ad6e 100644
--- a/.github/workflows/R-CMD-check-windows.yaml
+++ b/.github/workflows/R-CMD-check-windows.yaml
@@ -52,6 +52,7 @@ jobs:
 
       - name: Install dependencies
         run: |
+          options("install.packages.compile.from.source" = "never")
           remotes::install_deps(dependencies = TRUE)
           remotes::install_cran("rcmdcheck")
           remotes::install_cran("covr")