From c3934b4109bd99b9c9d79eda2baabb054a0ee7b3 Mon Sep 17 00:00:00 2001 From: Circle Ci Date: Sun, 29 Sep 2024 06:11:29 +0000 Subject: [PATCH] doc updates [skip ci] --- .../auto_examples_python.zip | Bin 28722 -> 28722 bytes .../intro_causal_graphs.zip | Bin 22097 -> 22097 bytes .../inducing_path.zip | Bin 10236 -> 10236 bytes .../plot_timeseries_graphs.zip | Bin 5390 -> 5390 bytes .../plot_mixed_edge_graph.zip | Bin 13774 -> 13774 bytes .../checking_validity_of_a_pag.zip | Bin 9337 -> 9337 bytes .../auto_examples_jupyter.zip | Bin 38586 -> 38586 bytes ...aw_and_compare_graphs_with_same_layout.zip | Bin 6338 -> 6338 bytes .../sphx_glr_plot_mixed_edge_graph_001.png | Bin 13942 -> 15757 bytes .../sphx_glr_plot_mixed_edge_graph_thumb.png | Bin 10995 -> 10216 bytes .../intro/checking_validity_of_a_pag.rst.txt | 8 +++--- .../auto_examples/intro/inducing_path.rst.txt | 2 +- .../intro/intro_causal_graphs.rst.txt | 6 ++--- .../intro/sg_execution_times.rst.txt | 12 ++++----- 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latent_variables=set(), state_variables={}, init_graph=, included_edges=, excluded_edges=, num_distributions=1, obs_distribution=True, intervention_targets=[], symmetric_diff_map={}, sigma_map={}, f_nodes=[], num_domains=1, domain_map={}, s_nodes=[]) + Context(observed_variables={'PSH', 'I', 'S', 'G', 'L'}, latent_variables=set(), state_variables={}, init_graph=, included_edges=, excluded_edges=, num_distributions=1, obs_distribution=True, intervention_targets=[], symmetric_diff_map={}, sigma_map={}, f_nodes=[], num_domains=1, domain_map={}, s_nodes=[]) True @@ -180,7 +180,7 @@ relationship. As such, the resulting graph is no longer a valid PAG. .. code-block:: none ConditioningSetSelection.PDS - Context(observed_variables={'I', 'L', 'S', 'PSH', 'G'}, latent_variables=set(), state_variables={}, init_graph=, included_edges=, excluded_edges=, num_distributions=1, obs_distribution=True, intervention_targets=[], symmetric_diff_map={}, sigma_map={}, f_nodes=[], num_domains=1, domain_map={}, s_nodes=[]) + Context(observed_variables={'PSH', 'I', 'S', 'G', 'L'}, latent_variables=set(), state_variables={}, init_graph=, included_edges=, excluded_edges=, num_distributions=1, obs_distribution=True, intervention_targets=[], symmetric_diff_map={}, sigma_map={}, f_nodes=[], num_domains=1, domain_map={}, s_nodes=[]) False @@ -195,9 +195,9 @@ References .. rst-class:: sphx-glr-timing - **Total running time of the script:** (0 minutes 1.163 seconds) + **Total running time of the script:** (0 minutes 1.121 seconds) -**Estimated memory usage:** 166 MB +**Estimated memory usage:** 167 MB .. _sphx_glr_download_auto_examples_intro_checking_validity_of_a_pag.py: diff --git a/dev/_sources/auto_examples/intro/inducing_path.rst.txt b/dev/_sources/auto_examples/intro/inducing_path.rst.txt index cc764ed48..111104288 100644 --- a/dev/_sources/auto_examples/intro/inducing_path.rst.txt +++ b/dev/_sources/auto_examples/intro/inducing_path.rst.txt @@ -241,7 +241,7 @@ References .. rst-class:: sphx-glr-timing - **Total running time of the script:** (0 minutes 1.156 seconds) + **Total running time of the script:** (0 minutes 1.110 seconds) **Estimated memory usage:** 165 MB diff --git a/dev/_sources/auto_examples/intro/intro_causal_graphs.rst.txt b/dev/_sources/auto_examples/intro/intro_causal_graphs.rst.txt index d00c958ac..b3bf9d0e1 100644 --- a/dev/_sources/auto_examples/intro/intro_causal_graphs.rst.txt +++ b/dev/_sources/auto_examples/intro/intro_causal_graphs.rst.txt @@ -169,7 +169,7 @@ Here, we will simulate some data to understand causal graphs in the context of S .. code-block:: none - Fitting causal models: 0%| | 0/5 [00:00 + @@ -427,7 +427,7 @@ References .. rst-class:: sphx-glr-timing - **Total running time of the script:** (0 minutes 3.040 seconds) + **Total running time of the script:** (0 minutes 2.325 seconds) **Estimated memory usage:** 251 MB diff --git a/dev/_sources/auto_examples/intro/sg_execution_times.rst.txt b/dev/_sources/auto_examples/intro/sg_execution_times.rst.txt index 029fc9f7e..6f6407762 100644 --- a/dev/_sources/auto_examples/intro/sg_execution_times.rst.txt +++ b/dev/_sources/auto_examples/intro/sg_execution_times.rst.txt @@ -6,7 +6,7 @@ Computation times ================= -**00:05.359** total execution time for 3 files **from auto_examples/intro**: +**00:04.555** total execution time for 3 files **from auto_examples/intro**: .. container:: @@ -33,11 +33,11 @@ Computation times - Time - Mem (MB) * - :ref:`sphx_glr_auto_examples_intro_intro_causal_graphs.py` (``intro_causal_graphs.py``) - - 00:03.040 + - 00:02.325 - 251.5 * - :ref:`sphx_glr_auto_examples_intro_checking_validity_of_a_pag.py` (``checking_validity_of_a_pag.py``) - - 00:01.163 - - 166.5 + - 00:01.121 + - 166.7 * - :ref:`sphx_glr_auto_examples_intro_inducing_path.py` (``inducing_path.py``) - - 00:01.156 - - 164.9 + - 00:01.110 + - 165.1 diff --git a/dev/_sources/auto_examples/mixededge/plot_mixed_edge_graph.rst.txt b/dev/_sources/auto_examples/mixededge/plot_mixed_edge_graph.rst.txt index 5ab30bfa8..0a3de87a0 100644 --- a/dev/_sources/auto_examples/mixededge/plot_mixed_edge_graph.rst.txt +++ b/dev/_sources/auto_examples/mixededge/plot_mixed_edge_graph.rst.txt @@ -154,7 +154,7 @@ Mixed Edge Graph Properties MixedEdgeGraph named 'IV Graph' with 3 nodes and 3 edges and 2 edge types is directed: False because there are directed edges. False ['directed', 'bidirected'] - {'directed': , 'bidirected': } + {'directed': , 'bidirected': } @@ -194,7 +194,7 @@ Mixed Edge Graph Operations on Nodes .. code-block:: none - MixedEdgeGraph named 'IV Graph' with 3 nodes and 3 edges and 2 edge types has nodes: ['Y', 'Z', 'X'] + MixedEdgeGraph named 'IV Graph' with 3 nodes and 3 edges and 2 edge types has nodes: ['Z', 'X', 'Y'] Graph has node A: False Now graph has node A: True Graph has node A: False @@ -312,9 +312,9 @@ class properties. Moreover, one can specify the edge type. .. rst-class:: sphx-glr-timing - **Total running time of the script:** (0 minutes 1.242 seconds) + **Total running time of the script:** (0 minutes 1.205 seconds) -**Estimated memory usage:** 171 MB +**Estimated memory usage:** 172 MB .. _sphx_glr_download_auto_examples_mixededge_plot_mixed_edge_graph.py: diff --git a/dev/_sources/auto_examples/mixededge/sg_execution_times.rst.txt b/dev/_sources/auto_examples/mixededge/sg_execution_times.rst.txt index 0cc8a9427..38b91439a 100644 --- a/dev/_sources/auto_examples/mixededge/sg_execution_times.rst.txt +++ b/dev/_sources/auto_examples/mixededge/sg_execution_times.rst.txt @@ -6,7 +6,7 @@ Computation times ================= -**00:01.242** total execution time for 1 file **from auto_examples/mixededge**: +**00:01.205** total execution time for 1 file **from auto_examples/mixededge**: .. container:: @@ -33,5 +33,5 @@ Computation times - Time - Mem (MB) * - :ref:`sphx_glr_auto_examples_mixededge_plot_mixed_edge_graph.py` (``plot_mixed_edge_graph.py``) - - 00:01.242 - - 171.2 + - 00:01.205 + - 171.5 diff --git a/dev/_sources/auto_examples/visualization/draw_and_compare_graphs_with_same_layout.rst.txt b/dev/_sources/auto_examples/visualization/draw_and_compare_graphs_with_same_layout.rst.txt index 6220d7af3..c75dd172e 100644 --- a/dev/_sources/auto_examples/visualization/draw_and_compare_graphs_with_same_layout.rst.txt +++ b/dev/_sources/auto_examples/visualization/draw_and_compare_graphs_with_same_layout.rst.txt @@ -139,7 +139,7 @@ such as `Dagitty `_. .. rst-class:: sphx-glr-timing - **Total running time of the script:** (0 minutes 0.454 seconds) + **Total running time of the script:** (0 minutes 0.425 seconds) **Estimated memory usage:** 165 MB diff --git a/dev/_sources/auto_examples/visualization/plot_timeseries_graphs.rst.txt b/dev/_sources/auto_examples/visualization/plot_timeseries_graphs.rst.txt index 829c284d7..d1c0270b4 100644 --- a/dev/_sources/auto_examples/visualization/plot_timeseries_graphs.rst.txt +++ b/dev/_sources/auto_examples/visualization/plot_timeseries_graphs.rst.txt @@ -136,7 +136,7 @@ which creates a nice default layout for time-series graphs. .. rst-class:: sphx-glr-timing - **Total running time of the script:** (0 minutes 1.069 seconds) + **Total running time of the script:** (0 minutes 1.072 seconds) **Estimated memory usage:** 165 MB diff --git a/dev/_sources/auto_examples/visualization/sg_execution_times.rst.txt b/dev/_sources/auto_examples/visualization/sg_execution_times.rst.txt index 9ecc2ab71..17292e319 100644 --- a/dev/_sources/auto_examples/visualization/sg_execution_times.rst.txt +++ b/dev/_sources/auto_examples/visualization/sg_execution_times.rst.txt @@ -6,7 +6,7 @@ Computation times ================= -**00:01.524** total execution time for 2 files **from auto_examples/visualization**: +**00:01.497** total execution time for 2 files **from auto_examples/visualization**: .. container:: @@ -33,8 +33,8 @@ Computation times - Time - Mem (MB) * - :ref:`sphx_glr_auto_examples_visualization_plot_timeseries_graphs.py` (``plot_timeseries_graphs.py``) - - 00:01.069 - - 164.9 + - 00:01.072 + - 165.1 * - :ref:`sphx_glr_auto_examples_visualization_draw_and_compare_graphs_with_same_layout.py` (``draw_and_compare_graphs_with_same_layout.py``) - - 00:00.454 - - 164.9 + - 00:00.425 + - 165.1 diff --git a/dev/_sources/sg_execution_times.rst.txt b/dev/_sources/sg_execution_times.rst.txt index 8b1cc0213..75249572a 100644 --- a/dev/_sources/sg_execution_times.rst.txt +++ b/dev/_sources/sg_execution_times.rst.txt @@ -6,7 +6,7 @@ Computation times ================= -**00:08.125** total execution time for 6 files **from all galleries**: +**00:07.258** total execution time for 6 files **from all galleries**: .. container:: @@ -33,20 +33,20 @@ Computation times - Time - Mem (MB) * - :ref:`sphx_glr_auto_examples_intro_intro_causal_graphs.py` (``../examples/intro/intro_causal_graphs.py``) - - 00:03.040 + - 00:02.325 - 251.5 * - :ref:`sphx_glr_auto_examples_mixededge_plot_mixed_edge_graph.py` (``../examples/mixededge/plot_mixed_edge_graph.py``) - - 00:01.242 - - 171.2 + - 00:01.205 + - 171.5 * - :ref:`sphx_glr_auto_examples_intro_checking_validity_of_a_pag.py` (``../examples/intro/checking_validity_of_a_pag.py``) - - 00:01.163 - - 166.5 + - 00:01.121 + - 166.7 * - :ref:`sphx_glr_auto_examples_intro_inducing_path.py` (``../examples/intro/inducing_path.py``) - - 00:01.156 - - 164.9 + - 00:01.110 + - 165.1 * - :ref:`sphx_glr_auto_examples_visualization_plot_timeseries_graphs.py` (``../examples/visualization/plot_timeseries_graphs.py``) - - 00:01.069 - - 164.9 + - 00:01.072 + - 165.1 * - :ref:`sphx_glr_auto_examples_visualization_draw_and_compare_graphs_with_same_layout.py` (``../examples/visualization/draw_and_compare_graphs_with_same_layout.py``) - - 00:00.454 - - 164.9 + - 00:00.425 + - 165.1 diff --git a/dev/auto_examples/intro/checking_validity_of_a_pag.html b/dev/auto_examples/intro/checking_validity_of_a_pag.html index 0b9755634..efc5633f0 100644 --- a/dev/auto_examples/intro/checking_validity_of_a_pag.html +++ b/dev/auto_examples/intro/checking_validity_of_a_pag.html @@ -566,7 +566,7 @@

Validity of a PAG
ConditioningSetSelection.PDS
-Context(observed_variables={'I', 'L', 'S', 'PSH', 'G'}, latent_variables=set(), state_variables={}, init_graph=<networkx.classes.graph.Graph object at 0x7f859d882e90>, included_edges=<networkx.classes.graph.Graph object at 0x7f859d883590>, excluded_edges=<networkx.classes.graph.Graph object at 0x7f859d8839d0>, num_distributions=1, obs_distribution=True, intervention_targets=[], symmetric_diff_map={}, sigma_map={}, f_nodes=[], num_domains=1, domain_map={}, s_nodes=[])
+Context(observed_variables={'PSH', 'I', 'S', 'G', 'L'}, latent_variables=set(), state_variables={}, init_graph=<networkx.classes.graph.Graph object at 0x7f3328c40590>, included_edges=<networkx.classes.graph.Graph object at 0x7f3328c40c90>, excluded_edges=<networkx.classes.graph.Graph object at 0x7f3328c410d0>, num_distributions=1, obs_distribution=True, intervention_targets=[], symmetric_diff_map={}, sigma_map={}, f_nodes=[], num_domains=1, domain_map={}, s_nodes=[])
 True
@@ -585,7 +585,7 @@

Validity of a PAG
ConditioningSetSelection.PDS
-Context(observed_variables={'I', 'L', 'S', 'PSH', 'G'}, latent_variables=set(), state_variables={}, init_graph=<networkx.classes.graph.Graph object at 0x7f859d69f850>, included_edges=<networkx.classes.graph.Graph object at 0x7f859d69ff50>, excluded_edges=<networkx.classes.graph.Graph object at 0x7f859d6a03d0>, num_distributions=1, obs_distribution=True, intervention_targets=[], symmetric_diff_map={}, sigma_map={}, f_nodes=[], num_domains=1, domain_map={}, s_nodes=[])
+Context(observed_variables={'PSH', 'I', 'S', 'G', 'L'}, latent_variables=set(), state_variables={}, init_graph=<networkx.classes.graph.Graph object at 0x7f326086d150>, included_edges=<networkx.classes.graph.Graph object at 0x7f326086d850>, excluded_edges=<networkx.classes.graph.Graph object at 0x7f326086dc90>, num_distributions=1, obs_distribution=True, intervention_targets=[], symmetric_diff_map={}, sigma_map={}, f_nodes=[], num_domains=1, domain_map={}, s_nodes=[])
 False
@@ -601,8 +601,8 @@

ReferencesTotal running time of the script: (0 minutes 1.163 seconds)

-

Estimated memory usage: 166 MB

+

Total running time of the script: (0 minutes 1.121 seconds)

+

Estimated memory usage: 167 MB