diff --git a/binder/requirements.txt b/binder/requirements.txt index 998f323..1a1f3d3 100644 --- a/binder/requirements.txt +++ b/binder/requirements.txt @@ -1,6 +1,6 @@ -scipy==1.1.0 +scipy==1.2.1 seaborn==0.9.0 matplotlib==2.2.3 -numpy==1.14.3 -pandas==0.23.0 +numpy==1.16.2 +pandas==0.24.2 statsmodels==0.9.0 diff --git a/notebooks/response_figures.ipynb b/notebooks/response_figures.ipynb index e180819..3176c30 100644 --- a/notebooks/response_figures.ipynb +++ b/notebooks/response_figures.ipynb @@ -79,7 +79,7 @@ "set.seed(12345)\n", "\n", "# read in third-generation DNMs\n", - "gen3 = read.csv(\"../../dnm-analysis/ceph/manuscript/third_gen.dnms.summary.csv\")\n", + "gen3 = read.csv(\"../data/third_gen.dnms.summary.csv\")\n", "\n", "# number of subsampling experiments to perform\n", "n_sims = 100\n", @@ -314,7 +314,7 @@ "library(cowplot)\n", "\n", "# read in third-generation DNMs\n", - "gen3 = read.csv(\"../../dnm-analysis/ceph/manuscript/third_gen.dnms.summary.csv\")\n", + "gen3 = read.csv(\"../data/third_gen.dnms.summary.csv\")\n", "\n", "orig_df = data.frame()\n", "\n",