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A user is part of 2 different groups A and B on OMERO.
If an image is imported from group A, the image is imported in QuPath without any issue.
Then, if we try to import a second image from the group B, it fails with the following error :
15:22:31.722 [project-import11] ERROR qupath.ext.omero.core.imageserver.OmeroImageServer Couldn't create pixel API reader java.io.IOException: Couldn't find requested image of ID 516335
at qupath.ext.omero.core.pixelapis.ice.IceReader.<init>(IceReader.java:111)
at qupath.ext.omero.core.pixelapis.ice.IceAPI.createReader(IceAPI.java:143)
at qupath.ext.omero.core.imageserver.OmeroImageServer.create(OmeroImageServer.java:111)
at qupath.ext.omero.core.imageserver.OmeroImageServerBuilder.lambda$buildServer$0(OmeroImageServerBuilder.java:30)
at java.base/java.util.Optional.flatMap(Unknown Source)
at qupath.ext.omero.core.imageserver.OmeroImageServerBuilder.buildServer(OmeroImageServerBuilder.java:30)
at qupath.lib.images.servers.ImageServerBuilder$DefaultImageServerBuilder.buildOriginal(ImageServerBuilder.java:350)
at qupath.lib.images.servers.ImageServerBuilder$AbstractServerBuilder.build(ImageServerBuilder.java:174)
at qupath.lib.gui.commands.ProjectImportImagesCommand.initializeEntry(ProjectImportImagesCommand.java:727)
at qupath.lib.gui.commands.ProjectImportImagesCommand$1.lambda$call$2(ProjectImportImagesCommand.java:468)
at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Unknown Source)
at java.base/java.util.concurrent.FutureTask.run(Unknown Source)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
at java.base/java.lang.Thread.run(Unknown Source)
My guess is that the security context is not updated to access to the correct group (I already had this issue on my side, reported here BIOP/qupath-extension-biop-omero#7). this.securityContext = new SecurityContext(groupId); to switch group.
The text was updated successfully, but these errors were encountered:
A user is part of 2 different groups A and B on OMERO.
My guess is that the security context is not updated to access to the correct group (I already had this issue on my side, reported here BIOP/qupath-extension-biop-omero#7).
this.securityContext = new SecurityContext(groupId);
to switch group.The text was updated successfully, but these errors were encountered: