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Conda Package Generation failure Late November 2021 #927

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traversaro opened this issue Nov 23, 2021 · 11 comments · Fixed by #937
Closed

Conda Package Generation failure Late November 2021 #927

traversaro opened this issue Nov 23, 2021 · 11 comments · Fixed by #937

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@traversaro
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traversaro commented Nov 23, 2021

Error:

Traceback (most recent call last):
  File "/usr/share/miniconda/envs/test/bin/conda-mambabuild", line 7, in <module>
    from boa.cli.mambabuild import main
  File "/usr/share/miniconda/envs/test/lib/python3.8/site-packages/boa/cli/mambabuild.py", line 17, in <module>
    from boa.core.solver import MambaSolver
  File "/usr/share/miniconda/envs/test/lib/python3.8/site-packages/boa/core/solver.py", line 22, in <module>
    from mamba import mamba_api
ImportError: cannot import name 'mamba_api' from 'mamba' (/usr/share/miniconda/envs/test/lib/python3.8/site-packages/mamba/__init__.py

Diff between latest working version:

--- <unnamed>
+++ <unnamed>
@@ -5,7 +5,7 @@
 backports                 1.0                        py_2    conda-forge
 backports.functools_lru_cache 1.6.4              pyhd8ed1ab_0    conda-forge
 beautifulsoup4            4.10.0             pyha770c72_0    conda-forge
-boa                       0.7.1              pyha770c72_0    conda-forge
+boa                       0.5.0            py38h578d9bd_0    conda-forge
 brotlipy                  0.7.0           py38h497a2fe_1003    conda-forge
 bzip2                     1.0.8                h7f98852_4    conda-forge
 c-ares                    1.18.1               h7f98852_0    conda-forge
@@ -17,19 +17,20 @@
 clyent                    1.2.2                      py_1    conda-forge
 colorama                  0.4.4              pyh9f0ad1d_0    conda-forge
 commonmark                0.9.1                      py_0    conda-forge
-conda                     4.10.3           py38h578d9bd_3    conda-forge
-conda-build               3.21.6           py38h578d9bd_0    conda-forge
-conda-forge-pinning       2021.11.15.20.12.07      hd8ed1ab_0    conda-forge
+conda                     4.10.3           py38h578d9bd_4    conda-forge
+conda-build               3.21.6           py38h578d9bd_1    conda-forge
+conda-forge-pinning       2021.11.22.15.24.15      hd8ed1ab_0    conda-forge
 conda-package-handling    1.7.3            py38h497a2fe_1    conda-forge
 cryptography              35.0.0           py38h3e25421_2    conda-forge
 dataclasses               0.8                pyhc8e2a94_3    conda-forge
-filelock                  3.3.2              pyhd8ed1ab_0    conda-forge
+filelock                  3.4.0              pyhd8ed1ab_0    conda-forge
 future                    0.18.2           py38h578d9bd_4    conda-forge
 glob2                     0.7                        py_0    conda-forge
 icu                       69.1                 h9c3ff4c_0    conda-forge
 idna                      3.1                pyhd3deb0d_0    conda-forge
 importlib-metadata        4.8.2            py38h578d9bd_0    conda-forge
 importlib_resources       5.4.0              pyhd8ed1ab_0    conda-forge
+inotify_simple            1.3.5            py38h578d9bd_1    conda-forge
 ipython_genutils          0.2.0                      py_1    conda-forge
 jinja2                    3.0.3              pyhd8ed1ab_0    conda-forge
 joblib                    1.1.0              pyhd8ed1ab_0    conda-forge
@@ -47,6 +48,8 @@
 libgomp                   11.2.0              h1d223b6_11    conda-forge
 libiconv                  1.16                 h516909a_0    conda-forge
 liblief                   0.11.5               h9c3ff4c_1    conda-forge
+libmamba                  0.18.1               h3985d26_1    conda-forge
+libmambapy                0.18.1           py38h908000c_1    conda-forge
 libnghttp2                1.43.0               h812cca2_1    conda-forge
 libnsl                    2.0.0                h7f98852_0    conda-forge
 libsolv                   0.7.19               h780b84a_5    conda-forge
@@ -56,7 +59,7 @@
 libzlib                   1.2.11            h36c2ea0_1013    conda-forge
 lz4-c                     1.9.3                h9c3ff4c_1    conda-forge
 lzo                       2.10              h516909a_1000    conda-forge
-mamba                     0.17.0           py38h2aa5da1_0    conda-forge
+mamba                     0.18.1           py38h1abaa86_1    conda-forge
 markupsafe                2.0.1            py38h497a2fe_1    conda-forge
 multisheller              0.2.0                    pypi_0    pypi
 nbformat                  5.1.3              pyhd8ed1ab_0    conda-forge
@@ -65,11 +68,12 @@
 openssl                   1.1.1l               h7f98852_0    conda-forge
 patchelf                  0.13                 h58526e2_0    conda-forge
 pip                       21.3.1             pyhd8ed1ab_0    conda-forge
-pkginfo                   1.7.1              pyhd8ed1ab_0    conda-forge
+pkginfo                   1.8.1              pyhd8ed1ab_0    conda-forge
 prompt-toolkit            3.0.22             pyha770c72_0    conda-forge
 prompt_toolkit            3.0.22               hd8ed1ab_0    conda-forge
 psutil                    5.8.0            py38h497a2fe_2    conda-forge
 py-lief                   0.11.5           py38h709712a_1    conda-forge
+pybind11-abi              4                    hd8ed1ab_3    conda-forge
 pycosat                   0.6.3           py38h497a2fe_1009    conda-forge
 pycparser                 2.21               pyhd8ed1ab_0    conda-forge
 pygments                  2.10.0             pyhd8ed1ab_0    conda-forge
@@ -78,7 +82,7 @@
 pysocks                   1.7.1            py38h578d9bd_4    conda-forge
 python                    3.8.12          hb7a2778_2_cpython    conda-forge
 python-dateutil           2.8.2              pyhd8ed1ab_0    conda-forge
-python-libarchive-c       3.1              py38h578d9bd_0    conda-forge
+python-libarchive-c       3.1              py38h578d9bd_1    conda-forge
 python_abi                3.8                      2_cp38    conda-forge
 pytz                      2021.3             pyhd8ed1ab_0    conda-forge
 pyyaml                    6.0              py38h497a2fe_3    conda-forge
@@ -86,12 +90,12 @@
 reproc                    14.2.3               h7f98852_0    conda-forge
 reproc-cpp                14.2.3               h9c3ff4c_0    conda-forge
 requests                  2.26.0             pyhd8ed1ab_0    conda-forge
-rich                      10.13.0          py38h578d9bd_0    conda-forge
+rich                      10.14.0          py38h578d9bd_1    conda-forge
 ripgrep                   13.0.0               habb4d0f_1    conda-forge
 ruamel.yaml               0.17.17          py38h497a2fe_1    conda-forge
 ruamel.yaml.clib          0.2.6            py38h497a2fe_0    conda-forge
 ruamel_yaml               0.15.80         py38h497a2fe_1006    conda-forge
-setuptools                59.1.0           py38h578d9bd_0    conda-forge
+setuptools                59.2.0           py38h578d9bd_0    conda-forge
 six                       1.16.0             pyh6c4a22f_0    conda-forge
 soupsieve                 2.3                pyhd8ed1ab_0    conda-forge
 sqlite                    3.36.0               h9cd32fc_2    conda-forge
@@ -100,11 +104,11 @@
 traitlets                 5.1.1              pyhd8ed1ab_0    conda-forge
 typing_extensions         3.10.0.2           pyha770c72_0    conda-forge
 urllib3                   1.26.7             pyhd8ed1ab_0    conda-forge
-watchgod                  0.7                pyhd8ed1ab_0    conda-forge
 wcwidth                   0.2.5              pyh9f0ad1d_2    conda-forge
 wheel                     0.37.0             pyhd8ed1ab_1    conda-forge
 xz                        5.2.5                h516909a_1    conda-forge
 yaml                      0.2.5                h516909a_0    conda-forge
+yaml-cpp                  0.6.3                he1b5a44_4    conda-forge
 zipp                      3.6.0              pyhd8ed1ab_0    conda-forge
 zlib                      1.2.11            h36c2ea0_1013    conda-forge
 zstd                      1.5.0                ha95c52a_0    conda-forge
@traversaro
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For some reason, boa 0.5.0 gets installed instead of the latest one.

@traversaro
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I think this was just a problem that the latest boa was not compatible with the latest mamba, and so an old boa with the wrong mamba dependency constraint was pulled instead. xref mamba-org/boa#220 .

@traversaro
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Probably this was fixed by conda-forge/boa-feedstock#35 .

@traversaro
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I think this was just a problem that the latest boa was not compatible with the latest mamba, and so an old boa with the wrong mamba dependency constraint was pulled instead. xref mamba-org/boa#220 .

The long term solution for this would be a repodata patch with a pr to https://github.com/conda-forge/conda-forge-repodata-patches-feedstock for fixing the dependency compatibility information for boa 0.5.0 .

@traversaro
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I launched a new conda package build in https://github.com/robotology/robotology-superbuild/actions/runs/1506648161, but I guess it will now work as for packages that depend on gazebo we may need to bump the cos version used from 6 to 7 due to the latest mesalib dependency, see #929 and conda-forge/conda-forge.github.io#1436 .

@traversaro
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I launched a new conda package build in https://github.com/robotology/robotology-superbuild/actions/runs/1506648161, but I guess it will now work as for packages that depend on gazebo we may need to bump the cos version used from 6 to 7 due to the latest mesalib dependency, see #929 and conda-forge/conda-forge.github.io#1436 .

That build worked successfully for mac and Windows, but it fails for Linux with error:

2021-11-26T09:50:27.0851986Z FAILED: plugins/depthCamera/CMakeFiles/gazebo_yarp_depthCamera.dir/src/DepthCameraDriver.cpp.o 
2021-11-26T09:50:27.0863009Z $BUILD_PREFIX/bin/x86_64-conda-linux-gnu-c++ -DBOOST_ALL_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_THREAD_DYN_LINK -DLIBBULLET_VERSION=3.17 -DLIBBULLET_VERSION_GT_282 -Dgazebo_yarp_depthCamera_EXPORTS -I$SRC_DIR/plugins/depthCamera/include/gazebo -I$SRC_DIR/plugins/depthCamera/include/yarp/dev -I$SRC_DIR/plugins/depthCamera/include -I$SRC_DIR/libraries/common/include -I$SRC_DIR/libraries/singleton/include -isystem $PREFIX/include/gazebo-11 -isystem $PREFIX/include/bullet -isystem $PREFIX/include/simbody -isystem $PREFIX/include/sdformat-9.3 -isystem $PREFIX/include/ignition/math6 -isystem $PREFIX/include/OGRE -isystem $PREFIX/include/OGRE/Bites -isystem $PREFIX/include/SDL2 -isystem $PREFIX/include/OGRE/HLMS -isystem $PREFIX/include/OGRE/MeshLodGenerator -isystem $PREFIX/include/OGRE/Overlay -isystem $PREFIX/include/OGRE/Paging -isystem $PREFIX/include/OGRE/Property -isystem $PREFIX/include/OGRE/RTShaderSystem -isystem $PREFIX/include/OGRE/Terrain -isystem $PREFIX/include/OGRE/Volume -isystem $PREFIX/include/ignition/transport8 -isystem $PREFIX/include/ignition/msgs5 -isystem $PREFIX/include/ignition/common3 -isystem $PREFIX/include/ignition/fuel_tools4 -isystem $PREFIX/include/eigen3 -isystem $PREFIX/include/sdformat-9.3/sdf/.. -isystem $PREFIX/include/ignition/cmake2 -isystem $PREFIX/include/uuid -isystem $PREFIX/include/opencv4 -fvisibility-inlines-hidden -std=c++17 -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem $PREFIX/include -fdebug-prefix-map=$SRC_DIR=/usr/local/src/conda/gazebo-yarp-plugins-4.0.0 -fdebug-prefix-map=$PREFIX=/usr/local/src/conda-prefix -O3 -DNDEBUG -fPIC -I$PREFIX/include/uuid -MD -MT plugins/depthCamera/CMakeFiles/gazebo_yarp_depthCamera.dir/src/DepthCameraDriver.cpp.o -MF plugins/depthCamera/CMakeFiles/gazebo_yarp_depthCamera.dir/src/DepthCameraDriver.cpp.o.d -o plugins/depthCamera/CMakeFiles/gazebo_yarp_depthCamera.dir/src/DepthCameraDriver.cpp.o -c $SRC_DIR/plugins/depthCamera/src/DepthCameraDriver.cpp
2021-11-26T09:50:27.0871828Z In file included from $PREFIX/include/gazebo-11/gazebo/transport/Node.hh:21,
2021-11-26T09:50:27.0872752Z                  from $PREFIX/include/gazebo-11/gazebo/rendering/Camera.hh:40,
2021-11-26T09:50:27.0873575Z                  from $SRC_DIR/plugins/depthCamera/include/yarp/dev/DepthCameraDriver.h:16,
2021-11-26T09:50:27.0874442Z                  from $SRC_DIR/plugins/depthCamera/src/DepthCameraDriver.cpp:8:
2021-11-26T09:50:27.0875594Z $PREFIX/include/tbb/task.h:21:139: note: #pragma message: TBB Warning: tbb/task.h is deprecated. For details, please see Deprecated Features appendix in the TBB reference manual.
2021-11-26T09:50:27.0876928Z    21 | #pragma message("TBB Warning: tbb/task.h is deprecated. For details, please see Deprecated Features appendix in the TBB reference manual.")
2021-11-26T09:50:27.0877767Z       |                                                                                                                                           ^
2021-11-26T09:50:27.0878390Z In file included from $PREFIX/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
2021-11-26T09:50:27.0879118Z                  from $PREFIX/include/boost/smart_ptr/detail/yield_k.hpp:23,
2021-11-26T09:50:27.0879819Z                  from $PREFIX/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
2021-11-26T09:50:27.0880524Z                  from $PREFIX/include/boost/smart_ptr/detail/spinlock.hpp:42,
2021-11-26T09:50:27.0881230Z                  from $PREFIX/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
2021-11-26T09:50:27.0881900Z                  from $PREFIX/include/boost/smart_ptr/shared_ptr.hpp:29,
2021-11-26T09:50:27.0882488Z                  from $PREFIX/include/boost/shared_ptr.hpp:17,
2021-11-26T09:50:27.0883222Z                  from $SRC_DIR/plugins/depthCamera/include/yarp/dev/DepthCameraDriver.h:15,
2021-11-26T09:50:27.0884104Z                  from $SRC_DIR/plugins/depthCamera/src/DepthCameraDriver.cpp:8:
2021-11-26T09:50:27.0885627Z $PREFIX/include/boost/bind.hpp:36:1: note: #pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.
2021-11-26T09:50:27.0886934Z    36 | BOOST_PRAGMA_MESSAGE(
2021-11-26T09:50:27.0887308Z       | ^~~~~~~~~~~~~~~~~~~~
2021-11-26T09:50:27.0887927Z during GIMPLE pass: printf-return-value
2021-11-26T09:50:27.0889546Z $SRC_DIR/plugins/depthCamera/src/DepthCameraDriver.cpp: In member function 'virtual bool yarp::dev::GazeboYarpDepthCameraDriver::open(yarp::os::Searchable&)':
2021-11-26T09:50:27.0890996Z $SRC_DIR/plugins/depthCamera/src/DepthCameraDriver.cpp:75: internal compiler error: in subspan, at input.h:68
2021-11-26T09:50:27.0892150Z    75 | bool GazeboYarpDepthCameraDriver::open(yarp::os::Searchable &config)
2021-11-26T09:50:27.0892781Z       | 
2021-11-26T09:50:27.0893157Z Please submit a full bug report,
2021-11-26T09:50:27.0893691Z with preprocessed source if appropriate.
2021-11-26T09:50:27.0894339Z See <https://gcc.gnu.org/bugs/> for instructions.

However, now we are back to the fact that an old boa version is installed because a new mamba minor release was released.

@traversaro
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traversaro commented Dec 2, 2021

I tried to add a workaround to the fact that boa 0.8 and mamba 0.19 get installed together, but installing 0.8 and 0.18 failed on Windows with error:

Traceback (most recent call last):
  File "C:\Miniconda\envs\test\Scripts\conda-mambabuild-script.py", line 9, in <module>
    sys.exit(main())
  File "C:\Miniconda\envs\test\lib\site-packages\boa\cli\mambabuild.py", line 206, in main
    config = prepare(**args.__dict__)
  File "C:\Miniconda\envs\test\lib\site-packages\boa\cli\mambabuild.py", line 150, in prepare
    init_api_context()
  File "C:\Miniconda\envs\test\lib\site-packages\mamba\utils.py", line 190, in init_api_context
    api_ctx = api.Context()
AttributeError: module 'libmambapy' has no attribute 'Context'

While using 0.7 and 0.17 worked fine.

@traversaro
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However, now we are back to the fact that an old boa version is installed because a new mamba minor release was released.

This was solved by #937 (fixing boa and mamba to known versions) but now we are back to the internal compiler error in gazebo-yarp-plugins:

2021-12-02T20:28:00.0129057Z during GIMPLE pass: printf-return-value
2021-12-02T20:28:00.0130997Z $SRC_DIR/plugins/depthCamera/src/DepthCameraDriver.cpp: In member function 'virtual bool yarp::dev::GazeboYarpDepthCameraDriver::open(yarp::os::Searchable&)':
2021-12-02T20:28:00.0132664Z $SRC_DIR/plugins/depthCamera/src/DepthCameraDriver.cpp:75: internal compiler error: in subspan, at input.h:68
2021-12-02T20:28:00.0133936Z    75 | bool GazeboYarpDepthCameraDriver::open(yarp::os::Searchable &config)

I have to think a bit how to handle this.

@traversaro
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I have to think a bit how to handle this.

I tried to add a workaround in #937, let's hope it works.

@traversaro
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I have to think a bit how to handle this.

I tried to add a workaround in #937, let's hope it works.

It does not. Let's try a more deterministic approach. I took the latest successful build, and let's see the difference in the build and host environment.

Build env diff:

--- <unnamed>
+++ <unnamed>
@@ -1,4 +1,3 @@
-
 _libgcc_mutex:            0.1-conda_forge         conda-forge
 _openmp_mutex:            4.5-1_gnu               conda-forge
 binutils_impl_linux-64:   2.36.1-h193b22a_2       conda-forge
@@ -15,7 +14,7 @@
 kernel-headers_linux-64:  2.6.32-he073ed8_15      conda-forge
 krb5:                     1.19.2-h48eae69_3       conda-forge
 ld_impl_linux-64:         2.36.1-hea4e1c9_2       conda-forge
-libcurl:                  7.80.0-h494985f_0       conda-forge
+libcurl:                  7.80.0-h494985f_1       conda-forge
 libedit:                  3.1.20191231-he28a2e2_2 conda-forge
 libev:                    4.33-h516909a_1         conda-forge
 libgcc-devel_linux-64:    9.4.0-hd854feb_11       conda-forge

Host env diff:

--- <unnamed>
+++ <unnamed>
@@ -1,6 +1,6 @@
 _libgcc_mutex:             0.1-conda_forge            conda-forge
 _openmp_mutex:             4.5-1_gnu                  conda-forge
-ace:                       7.0.4-h9c3ff4c_0           conda-forge
+ace:                       7.0.5-h9c3ff4c_0           conda-forge
 alsa-lib:                  1.2.3-h516909a_0           conda-forge
 aom:                       3.2.0-h9c3ff4c_2           conda-forge
 assimp:                    5.0.1-hedfc422_7           conda-forge
@@ -11,17 +11,18 @@
 c-ares:                    1.18.1-h7f98852_0          conda-forge
 ca-certificates:           2021.10.8-ha878542_0       conda-forge
 cairo:                     1.16.0-h6cf1ce9_1008       conda-forge
-cfitsio:                   3.470-hb418390_7           conda-forge
+cfitsio:                   4.0.0-h9a35b8e_0           conda-forge
 console_bridge:            1.0.1-h4bd325d_0           conda-forge
 cppzmq:                    4.8.1-hf7cf922_0           conda-forge
 curl:                      7.80.0-h2574ce0_0          conda-forge
-dartsim:                   6.10.1-he39ca3a_1          conda-forge
+dartsim:                   6.12.1-he39ca3a_0          conda-forge
 dbus:                      1.13.6-h48d8840_2          conda-forge
 eigen:                     3.4.0-h4bd325d_0           conda-forge
+elfutils:                  0.186-he364ef2_0           conda-forge
 expat:                     2.4.1-h9c3ff4c_0           conda-forge
-fcl:                       0.6.1-h2cbc392_3           conda-forge
+fcl:                       0.7.0-h2cbc392_0           conda-forge
 ffmpeg:                    4.4.1-h6987444_0           conda-forge
-flann:                     1.9.1-h2e58136_1008        conda-forge
+flann:                     1.9.1-hfe772e8_1009        conda-forge
 font-ttf-dejavu-sans-mono: 2.37-hab24e00_0            conda-forge
 font-ttf-inconsolata:      3.000-h77eed37_0           conda-forge
 font-ttf-source-code-pro:  2.038-h77eed37_0           conda-forge
@@ -34,15 +35,15 @@
 freetype:                  2.10.4-h0708190_1          conda-forge
 freexl:                    1.0.6-h7f98852_0           conda-forge
 fribidi:                   1.0.10-h36c2ea0_0          conda-forge
-gazebo:                    11.8.1-hf1d4fb3_0          conda-forge
+gazebo:                    11.9.1-h3bcc8cc_0          conda-forge
 gdbm:                      1.18-h0a1914f_2            conda-forge
 gdk-pixbuf:                2.42.6-h04a7f16_0          conda-forge
-geos:                      3.9.1-h9c3ff4c_2           conda-forge
-geotiff:                   1.6.0-h4f31c25_6           conda-forge
+geos:                      3.10.0-h9c3ff4c_0          conda-forge
+geotiff:                   1.7.0-hcfb7246_3           conda-forge
 gettext:                   0.19.8.1-h73d1719_1008     conda-forge
 giflib:                    5.2.1-h36c2ea0_2           conda-forge
-glib:                      2.70.0-h780b84a_1          conda-forge
-glib-tools:                2.70.0-h780b84a_1          conda-forge
+glib:                      2.70.1-h780b84a_0          conda-forge
+glib-tools:                2.70.1-h780b84a_0          conda-forge
 gmp:                       6.2.1-h58526e2_0           conda-forge
 gnutls:                    3.6.13-h85f3911_1          conda-forge
 graphite2:                 1.3.13-h58526e2_1001       conda-forge
@@ -51,23 +52,24 @@
 gstreamer:                 1.18.5-h9f60fe5_2          conda-forge
 gtk2:                      2.24.33-h539f30e_1         conda-forge
 gts:                       0.7.6-h64030ff_2           conda-forge
-harfbuzz:                  2.9.1-h83ec7ef_1           conda-forge
+harfbuzz:                  3.1.1-h83ec7ef_0           conda-forge
 hdf4:                      4.2.15-h10796ff_3          conda-forge
-hdf5:                      1.10.6-nompi_h6a2412b_1114 conda-forge
+hdf5:                      1.12.1-nompi_h2750804_102  conda-forge
 icu:                       68.2-h9c3ff4c_0            conda-forge
 ilmbase:                   2.5.5-h780b84a_0           conda-forge
-jasper:                    1.900.1-h07fcdf6_1006      conda-forge
+jasper:                    2.0.33-ha77e612_0          conda-forge
 jbig:                      2.1-h7f98852_2003          conda-forge
 jpeg:                      9d-h36c2ea0_0              conda-forge
 json-c:                    0.15-h98cffda_0            conda-forge
 jsoncpp:                   1.9.4-h4bd325d_3           conda-forge
 jxrlib:                    1.1-h7f98852_2             conda-forge
-kealib:                    1.4.14-hcc255d8_2          conda-forge
+kealib:                    1.4.14-h87e4c3c_3          conda-forge
 krb5:                      1.19.2-hcc1bbae_3          conda-forge
 lame:                      3.100-h7f98852_1001        conda-forge
 lcms2:                     2.12-hddcbb42_0            conda-forge
 ld_impl_linux-64:          2.36.1-hea4e1c9_2          conda-forge
 lerc:                      3.0-h9c3ff4c_0             conda-forge
+libarchive:                3.5.2-hccf745f_1           conda-forge
 libblas:                   3.9.0-12_linux64_openblas  conda-forge
 libcblas:                  3.9.0-12_linux64_openblas  conda-forge
 libccd:                    2.1-h9c3ff4c_1             conda-forge
@@ -75,50 +77,51 @@
 libcurl:                   7.80.0-h2574ce0_0          conda-forge
 libdap4:                   3.20.6-hd7c4107_2          conda-forge
 libdeflate:                1.8-h7f98852_0             conda-forge
-libdrm:                    2.4.108-h7f98852_0         conda-forge
+libdrm:                    2.4.109-h7f98852_0         conda-forge
 libedit:                   3.1.20191231-he28a2e2_2    conda-forge
 libev:                     4.33-h516909a_1            conda-forge
 libevent:                  2.1.10-h9b69904_4          conda-forge
 libffi:                    3.4.2-h7f98852_5           conda-forge
 libgcc-ng:                 11.2.0-h1d223b6_11         conda-forge
 libgd:                     2.3.3-h6ad9fb6_0           conda-forge
-libgdal:                   3.3.1-h07ae0cd_2           conda-forge
+libgdal:                   3.3.3-h18e3bf0_2           conda-forge
 libgfortran-ng:            11.2.0-h69a702a_11         conda-forge
 libgfortran5:              11.2.0-h5c6108e_11         conda-forge
-libglib:                   2.70.0-h174f98d_1          conda-forge
+libglib:                   2.70.1-h174f98d_0          conda-forge
 libglu:                    9.0.0-he1b5a44_1001        conda-forge
 libgomp:                   11.2.0-h1d223b6_11         conda-forge
 libiconv:                  1.16-h516909a_0            conda-forge
 libignition-cmake2:        2.9.0-h9c3ff4c_1           conda-forge
 libignition-common3:       3.13.2-ha44c05f_1          conda-forge
-libignition-fuel-tools4:   4.4.0-h9ff2376_1           conda-forge
+libignition-fuel-tools4:   4.4.0-h7b20e64_2           conda-forge
 libignition-math6:         6.9.2-h9c3ff4c_0           conda-forge
-libignition-msgs5:         5.7.0-hdf5dbbc_0           conda-forge
-libignition-tools1:        1.4.0-h33ecc0d_0           conda-forge
-libignition-transport8:    8.1.0-ha5287fc_7           conda-forge
+libignition-msgs5:         5.7.0-hf191057_1           conda-forge
+libignition-tools1:        1.4.1-h33ecc0d_2           conda-forge
+libignition-transport8:    8.1.0-h93cb40a_8           conda-forge
 libjpeg-turbo:             2.1.1-h7f98852_0           conda-forge
 libkml:                    1.3.0-h238a007_1014        conda-forge
 liblapack:                 3.9.0-12_linux64_openblas  conda-forge
 liblapacke:                3.9.0-12_linux64_openblas  conda-forge
 libllvm11:                 11.1.0-hf817b99_2          conda-forge
-libnetcdf:                 4.8.1-nompi_hcd642e3_100   conda-forge
+libmicrohttpd:             0.9.73-h7f98852_0          conda-forge
+libnetcdf:                 4.8.1-nompi_hb3fd0d9_101   conda-forge
 libnghttp2:                1.43.0-h812cca2_1          conda-forge
 libnsl:                    2.0.0-h7f98852_0           conda-forge
 libode:                    0.16.2-he80948d_9          conda-forge
 libogg:                    1.3.4-h7f98852_1           conda-forge
 libopenblas:               0.3.18-pthreads_h8fe5266_0 conda-forge
-libopencv:                 4.5.2-py37h8d8ab53_1       conda-forge
+libopencv:                 4.5.3-py37hbfc4018_5       conda-forge
 libopus:                   1.3.1-h7f98852_1           conda-forge
 libpciaccess:              0.16-h516909a_0            conda-forge
 libpng:                    1.6.37-h21135ba_2          conda-forge
-libpq:                     13.3-hd57d9b9_3            conda-forge
-libprotobuf:               3.16.0-h780b84a_0          conda-forge
+libpq:                     13.5-hd57d9b9_0            conda-forge
+libprotobuf:               3.18.1-h780b84a_0          conda-forge
 libraw:                    0.20.2-h10796ff_1          conda-forge
 librsvg:                   2.52.4-hc3c00ef_0          conda-forge
-librttopo:                 1.1.0-h1185371_6           conda-forge
+librttopo:                 1.1.0-h0ad649c_7           conda-forge
 libsdformat:               9.3.0-h21f569a_5           conda-forge
 libsodium:                 1.0.18-h36c2ea0_1          conda-forge
-libspatialite:             5.0.1-h8694cbe_6           conda-forge
+libspatialite:             5.0.1-h1d9e4f1_10          conda-forge
 libssh2:                   1.10.0-ha56f1ee_2          conda-forge
 libstdcxx-ng:              11.2.0-he4da1e4_11         conda-forge
 libtar:                    1.2.20-h7f98852_1003       conda-forge
@@ -138,13 +141,14 @@
 libzip:                    1.8.0-h4de3113_1           conda-forge
 libzlib:                   1.2.11-h36c2ea0_1013       conda-forge
 lz4-c:                     1.9.3-h9c3ff4c_1           conda-forge
-mesalib:                   18.3.1-h590aaf7_0          conda-forge
+lzo:                       2.10-h516909a_1000         conda-forge
+mesalib:                   21.2.5-h0e4506f_3          conda-forge
 mysql-common:              8.0.27-ha770c72_1          conda-forge
 mysql-libs:                8.0.27-hfa10184_1          conda-forge
 ncurses:                   6.2-h58526e2_4             conda-forge
 nettle:                    3.6-he412f7d_0             conda-forge
 nspr:                      4.32-h9c3ff4c_1            conda-forge
-nss:                       3.72-hb5efdd6_0            conda-forge
+nss:                       3.73-hb5efdd6_0            conda-forge
 octomap:                   1.9.7-h4bd325d_0           conda-forge
 ogre:                      1.10.12-hf655ca9_7         conda-forge
 openal-soft:               1.20.1-hc9558a2_0          conda-forge
@@ -152,14 +156,14 @@
 openh264:                  2.1.1-h780b84a_0           conda-forge
 openjpeg:                  2.4.0-hb52868f_1           conda-forge
 openssl:                   1.1.1l-h7f98852_0          conda-forge
-pango:                     1.48.10-hb8ff022_1         conda-forge
+pango:                     1.48.10-h54213e6_2         conda-forge
 pcre:                      8.45-h9c3ff4c_0            conda-forge
 pip:                       21.3.1-pyhd8ed1ab_0        conda-forge
 pixman:                    0.40.0-h36c2ea0_0          conda-forge
-poppler:                   21.03.0-h93df280_0         conda-forge
+poppler:                   21.09.0-ha39eefc_3         conda-forge
 poppler-data:              0.4.11-hd8ed1ab_0          conda-forge
-postgresql:                13.3-h2510834_3            conda-forge
-proj:                      8.0.1-h277dcde_0           conda-forge
+postgresql:                13.5-h2510834_0            conda-forge
+proj:                      8.1.1-h277dcde_2           conda-forge
 pthread-stubs:             0.4-h36c2ea0_1001          conda-forge
 pugixml:                   1.11.4-h9c3ff4c_0          conda-forge
 python:                    3.9.7-hb7a2778_3_cpython   conda-forge
@@ -168,12 +172,12 @@
 qwt:                       6.2.0-h7ec6b3e_0           conda-forge
 readline:                  8.1-h46c0cb4_0             conda-forge
 robot-testing-framework:   2.0.1-h9c3ff4c_0           conda-forge
-ruby:                      2.7.2-h86e321c_6           conda-forge
+ruby:                      2.7.2-h86e321c_7           conda-forge
 sdl:                       1.2.15-h9c3ff4c_1          conda-forge
 sdl2:                      2.0.12-h9c3ff4c_1          conda-forge
-setuptools:                59.1.0-py39hf3d152e_0      conda-forge
+setuptools:                59.4.0-py39hf3d152e_0      conda-forge
 simbody:                   3.7-h64f3f5a_2             conda-forge
-sqlite:                    3.36.0-h9cd32fc_2          conda-forge
+sqlite:                    3.37.0-h9cd32fc_0          conda-forge
 svt-av1:                   0.8.7-h9c3ff4c_1           conda-forge
 swig:                      4.0.2-hd3c618e_2           conda-forge
 tbb:                       2020.2-h4bd325d_4          conda-forge
@@ -190,7 +194,9 @@
 x264:                      1!161.3030-h7f98852_1      conda-forge
 x265:                      3.5-h4bd325d_1             conda-forge
 xerces-c:                  3.2.3-h9d8b166_3           conda-forge
+xorg-damageproto:          1.2.1-h7f98852_1002        conda-forge
 xorg-fixesproto:           5.0-h7f98852_1002          conda-forge
+xorg-glproto:              1.4.17-h7f98852_1002       conda-forge
 xorg-inputproto:           2.3.2-h7f98852_1002        conda-forge
 xorg-kbproto:              1.0.7-h7f98852_1002        conda-forge
 xorg-libice:               1.0.10-h7f98852_0          conda-forge
@@ -198,20 +204,25 @@
 xorg-libx11:               1.6.12-h36c2ea0_0          conda-forge
 xorg-libxau:               1.0.9-h7f98852_0           conda-forge
 xorg-libxaw:               1.0.14-h7f98852_0          conda-forge
+xorg-libxdamage:           1.1.5-h7f98852_0           conda-forge
 xorg-libxdmcp:             1.1.3-h7f98852_0           conda-forge
 xorg-libxext:              1.3.4-h516909a_0           conda-forge
 xorg-libxfixes:            5.0.3-h516909a_1004        conda-forge
 xorg-libxi:                1.7.10-h516909a_0          conda-forge
 xorg-libxmu:               1.1.3-h516909a_0           conda-forge
 xorg-libxpm:               3.5.13-h516909a_0          conda-forge
+xorg-libxrandr:            1.5.2-h516909a_1           conda-forge
 xorg-libxrender:           0.9.10-h516909a_1002       conda-forge
 xorg-libxt:                1.1.5-h516909a_1003        conda-forge
+xorg-randrproto:           1.5.0-h7f98852_1001        conda-forge
 xorg-renderproto:          0.11.1-h7f98852_1002       conda-forge
+xorg-util-macros:          1.19.3-h7f98852_0          conda-forge
 xorg-xextproto:            7.3.0-h7f98852_1002        conda-forge
+xorg-xf86vidmodeproto:     2.3.1-h7f98852_1002        conda-forge
 xorg-xproto:               7.0.31-h7f98852_1007       conda-forge
 xz:                        5.2.5-h516909a_1           conda-forge
 yaml:                      0.2.5-h516909a_0           conda-forge
-yarp:                      3.5.1-py39h44c2838_31      local      
+yarp:                      3.5.1-py39h9eeb8da_32      local      
 ycm-cmake-modules:         0.13.0-h9c3ff4c_0          conda-forge
 zeromq:                    4.3.4-h9c3ff4c_1           conda-forge
 zlib:                      1.2.11-h36c2ea0_1013       conda-forge

The build env is almost identical, while a possible relevant difference is gazebo 11.8 vs 11.9 . We can try to pin Gazebo to 11.8 .

@traversaro
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Manually pinning gazebo to 11.8 avoid the problem, see: https://github.com/robotology/robotology-superbuild/runs/4411667208?check_suite_focus=true .

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