Missing one subpopulation in the plot - subsetgrp

[mullerbsf]

Dear,

I am trying to plot fastSTRUCTURE results using pophelper. However, I using a list of individuals with the subpopulation label (pop_info). The first subpopulation "BOP" has 159 individuals and is not showing in the plot. I don't know how to fix it. Could you please assist me with that?

Please find below the script:

Population label

pop_info = data.frame(read.delim("WiDiv_panel_pop_info.txt", header=F,stringsAsFactors=F))
head(pop_info)
V1
1 BOP
2 Popcorn
3 Mixed
4 Sweet_corn
5 Mixed
6 BOP

K12

K12 = function(x) attr(x,"k")
spnames = paste0("K=", sapply(slist,K12))
plotQ(qlist=slist[4], splab=spnames[4], splabface="bold", splabsize=4, clustercol=c("red","blue","purple","coral","cyan","chartreuse","plum1","darkgreen","grey","tomato2","yellow","black"), height=4,
grplab=pop_info, subsetgrp=c("BOP", "IDT", "Mixed", "NSS-Mo17", "NSS-Oh43", "Popcorn", "SS-B14", "SS-B37", "SS-B73", "SS-BSSSC0", "Sweet_corn", "Tropical"), ordergrp=T, showlegend=T, legendtextsize=4,
grplabangle=-90, grplabjust=0, grplabpos=0.8, linepos=1, legendlab=c("K1","K2","K3","K4","K5","K6","K7","K8","K9","K10","K11","K12"),
showtitle=T, showsubtitle=T, titlelab="STRUCTURE", subtitlelab=expression("Population structure in" ~ italic("Zea mays") ~ "WiDiv panel"),
outputfilename="WiDiv_panel_Maize_543samples_Pop_K12", imgtype="png")

Plot

Thank you!

[mullerbsf]

@royfrancis could you please help me with this issue?

Thank you!