how to install the snpir::config module

[MinS1]

Hi,
when i run filter_mismatch_first6bp.pl script, they return me a errer like following:

Can't locate snpir/config.pm in @inc (you may need to install the snpir::config module) (@inc contains: /zs32/home/ssmin/SNPinRNAseq/SNPiR-master/../ /usr/local/perl/lib/5.24.1/x86_64-linux-thread-multi /usr/local/perl/lib/5.24.1 /usr/local/perl/lib /opt/tools/seq-analysis/vcftools_0.1.13/lib/perl5/site_perl /zs32/home/ssmin/perl5/lib/perl5/5.24.1/x86_64-linux-thread-multi /zs32/home/ssmin/perl5/lib/perl5/5.24.1 /zs32/home/ssmin/perl5/lib/perl5/x86_64-linux-thread-multi /zs32/home/ssmin/perl5/lib/perl5 /usr/local/perl/lib/site_perl/5.24.1/x86_64-linux-thread-multi /usr/local/perl/lib/site_perl/5.24.1 .) at filter_mismatch_first6bp.pl line 8.
BEGIN failed--compilation aborted at filter_mismatch_first6bp.pl line 8 (#1)

it reminder me to install the snpir::config module, but i don't know how to install snpir. I thought this software could be used without installation.Can you help me?Thank you very much!

[longqh3]

Hi, I also encountered this problem. I solved it by mannually copy /VaDiR/tools/SNPiR/SNPiR directory into @inc's path so that the perl can locate snpir/config.pm.
However the copy operation may require root priviledge. So if you have no root priviledge, you may have to install your own perl and designate your @inc path. I personally followed this link 非[无]root权限 服务器 下安装perl以及perl模块--转载 and succeeded. But its in Chinese so maybe you can find other instructions.

[ChoiJi-Hye]

It's been a long time since you asked, but I'll answer for others who will have the same problem.
It's easy to solve.
You make 'snpir' directory under the 'SNPiR-master' (/$PATH/SNPiR-master/snpir/), and then copy 'config.pm' into snpir directory. (/$PATH/SNPiR-master/snpir/config.pm)

I solved the same problem with this way.
I hope it helps someone.