From 616729684f004490878c1132c424512586360e6e Mon Sep 17 00:00:00 2001
From: Jovan Tanevski <tanevski@gmail.com>
Date: Fri, 1 Mar 2024 16:56:58 +0100
Subject: [PATCH] install omnipath module

---
 vignettes/FunctionalAndStructuralPipeline.Rmd | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/vignettes/FunctionalAndStructuralPipeline.Rmd b/vignettes/FunctionalAndStructuralPipeline.Rmd
index bafc87b..c227117 100644
--- a/vignettes/FunctionalAndStructuralPipeline.Rmd
+++ b/vignettes/FunctionalAndStructuralPipeline.Rmd
@@ -51,7 +51,7 @@ library(janitor)
 We will use some functions in python since the computation time is significantly shorter than in R. Python chunks start with a #In Python. Install and load the necessary package for Python:
 
 ```{r}
-py_install("decoupler", pip =TRUE )
+py_install(c("decoupler","omnipath"), pip =TRUE)
 ```
 
 ```{python}