From 5d87195a7d22c100525e37bd531d3bef6dd93b95 Mon Sep 17 00:00:00 2001 From: yumisims Date: Wed, 11 Oct 2023 17:11:54 +0100 Subject: [PATCH] fixed ci --- .github/workflows/ci.yml | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 574a38b..4a3f0c5 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -68,12 +68,12 @@ jobs: run: | mkdir NT_database curl -L https://ftp.ncbi.nlm.nih.gov/blast/db/18S_fungal_sequences.tar.gz | tar -C NT_database -xzf - - + - name: Download the subset of Diamond database run: | mkdir diamond - wget -c https://tolit.cog.sanger.ac.uk/test-data/resources/diamond/UP000000212_1234679_tax.dmnd -O diamond/UP000000212_1234679_tax.dmnd - + wget -c https://tolit.cog.sanger.ac.uk/test-data/resources/diamond/UP000000212_1234679_tax.dmnd -O diamond/UP000000212_1234679_tax.dmnd + - name: Run pipeline with test data - name: Run pipeline with test data # TODO nf-core: You can customise CI pipeline run tests as required