Trimming down output

[DLBPointon]

Description of feature

• The main merged results table: /nfs/treeoflife-01/teams/tola/users/dp24/ascc/test-truth/ascc/asccTinyTest_V2_contamination_check_merged_table.csv. Most of the outputs of processes are contained here.

• A BlobToolKit dataset if there is a merged BTK dataset, then this: /nfs/treeoflife-01/teams/tola/users/dp24/ascc/test-truth/merge/merged_datasets

  • if there is no merged BTK dataset, then output the one that exists of these (if present): /nfs/treeoflife-01/teams/tola/users/dp24/ascc/test-truth/create/btk_datasets - /nfs/treeoflife-01/teams/tola/users/dp24/ascc/test-truth/sanger/asccTinyTest_V2_btk_out/blobtoolkit/asccTinyTest_V2_filtered

• Vecscreen output from /nfs/treeoflife-01/teams/tola/users/dp24/ascc/test-truth/summarise

• Organellar BLAST output from /nfs/treeoflife-01/teams/tola/users/dp24/ascc/test-truth/organelle

• PacBio barcodes check final output files, which are in /nfs/treeoflife-01/teams/tola/users/dp24/ascc/test-truth/filter

• FCS-adaptor files from /nfs/treeoflife-01/teams/tola/users/dp24/ascc/test-truth/fcs

• contents of /nfs/treeoflife-01/teams/tola/users/dp24/ascc/test-truth/autofilter