From 66f08b55dc9d6721127e132da4f6d9f558d0f5d5 Mon Sep 17 00:00:00 2001
From: Robrecht Cannoodt <rcannood@gmail.com>
Date: Mon, 18 Sep 2023 11:55:27 +0200
Subject: [PATCH] fix linting issues

---
 R/AnnData.R    |  2 +-
 R/HDF5-write.R | 26 +++++++++++++-------------
 2 files changed, 14 insertions(+), 14 deletions(-)

diff --git a/R/AnnData.R b/R/AnnData.R
index b9b8389b..f0f0c553 100644
--- a/R/AnnData.R
+++ b/R/AnnData.R
@@ -61,4 +61,4 @@ AnnData <- function(
     var = var,
     layers = layers
   )
-}
\ No newline at end of file
+}
diff --git a/R/HDF5-write.R b/R/HDF5-write.R
index 62faf750..2aa635bc 100644
--- a/R/HDF5-write.R
+++ b/R/HDF5-write.R
@@ -6,7 +6,7 @@
 #' @param file Path to a H5AD file or an open H5AD handle
 #' @param name Name of the element within the H5AD file
 #' @param ... Additional arguments passed to writing functions
-#' 
+#'
 #' @noRd
 #'
 #' @details
@@ -67,7 +67,7 @@ write_h5ad_element <- function(value, file, name, ...) { # nolint
 #' Write H5AD encoding
 #'
 #' Write H5AD encoding attributes to an element in an H5AD file
-#' 
+#'
 #' @noRd
 #'
 #' @param file Path to a H5AD file or an open H5AD handle
@@ -120,7 +120,7 @@ write_h5ad_dense_array <- function(value, file, name, version = "0.2.0") {
 #' Write H5AD sparse array
 #'
 #' Write a sparse array to an H5AD file
-#' 
+#'
 #' @noRd
 #'
 #' @param value Value to write
@@ -191,7 +191,7 @@ write_h5ad_nullable_boolean <- function(value, file, name, version = "0.1.0") {
 #' Write H5AD nullable integer
 #'
 #' Write a nullable integer to an H5AD file
-#' 
+#'
 #' @noRd
 #'
 #' @param value Value to write
@@ -215,7 +215,7 @@ write_h5ad_nullable_integer <- function(value, file, name, version = "0.1.0") {
 #' Write a string array to an H5AD file
 #'
 #' @noRd
-#' 
+#'
 #' @param value Value to write
 #' @param file Path to a H5AD file or an open H5AD handle
 #' @param name Name of the element within the H5AD file
@@ -237,7 +237,7 @@ write_h5ad_string_array <- function(value, file, name, version = "0.2.0") {
 #' Write a categorical to an H5AD file
 #'
 #' @noRd
-#' 
+#'
 #' @param value Value to write
 #' @param file Path to a H5AD file or an open H5AD handle
 #' @param name Name of the element within the H5AD file
@@ -256,7 +256,7 @@ write_h5ad_categorical <- function(value, file, name, version = "0.2.0") {
 #' Write a string scalar to an H5AD file
 #'
 #' @noRd
-#' 
+#'
 #' @param value Value to write
 #' @param file Path to a H5AD file or an open H5AD handle
 #' @param name Name of the element within the H5AD file
@@ -280,7 +280,7 @@ write_h5ad_string_scalar <- function(value, file, name, version = "0.2.0") {
 #' Write a numeric scalar to an H5AD file
 #'
 #' @noRd
-#' 
+#'
 #' @param value Value to write
 #' @param file Path to a H5AD file or an open H5AD handle
 #' @param name Name of the element within the H5AD file
@@ -298,7 +298,7 @@ write_h5ad_numeric_scalar <- function(value, file, name, version = "0.2.0") {
 #' Write a mapping to an H5AD file
 #'
 #' @noRd
-#' 
+#'
 #' @param value Value to write
 #' @param file Path to a H5AD file or an open H5AD handle
 #' @param name Name of the element within the H5AD file
@@ -319,7 +319,7 @@ write_h5ad_mapping <- function(value, file, name, version = "0.1.0") {
 #' Write a data frame to an H5AD file
 #'
 #' @noRd
-#' 
+#'
 #' @param value Value to write
 #' @param file Path to a H5AD file or an open H5AD handle
 #' @param name Name of the element within the H5AD file
@@ -379,7 +379,7 @@ write_h5ad_data_frame <- function(value, file, name, index = NULL,
 #' Write an for a data frame to an H5AD file
 #'
 #' @noRd
-#' 
+#'
 #' @param value Value to write. Must be a vector to the same length as the data
 #' frame.
 #' @param file Path to a H5AD file or an open H5AD handle
@@ -414,7 +414,7 @@ write_h5ad_data_frame_index <- function(value, file, name, index_name) {
 #' Write a new empty H5AD file
 #'
 #' @noRd
-#' 
+#'
 #' @param file Path to the H5AD file to write
 #' @param obs_names Vector containing observation names
 #' @param var_names Vector containing variable names
@@ -452,7 +452,7 @@ write_empty_h5ad <- function(file, obs_names, var_names, version = "0.1.0") {
 #' Check that a path in HDF5 exists
 #'
 #' @noRd
-#' 
+#'
 #' @param file Path to a HDF5 file
 #' @param target_path The path within the file to test for
 #'