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I realized one thing: currently, to_Seurat will always write the expression to the assay of 'RNA'. I wonder if devs may add an option so that we can customize the assay the expression to be written to? We often do pure CITE-seq experiments, which means output from that usage should be in the assay of 'ADT'--which means an entire new Seurat object needs to be created to carry on the assay data because the assays' names of Seurat objects cannot be directly modified.
The text was updated successfully, but these errors were encountered:
I realized one thing: currently,
to_Seurat
will always write the expression to the assay of'RNA'
. I wonder if devs may add an option so that we can customize the assay the expression to be written to? We often do pure CITE-seq experiments, which means output from that usage should be in the assay of'ADT'
--which means an entire newSeurat
object needs to be created to carry on the assay data because the assays' names ofSeurat
objects cannot be directly modified.The text was updated successfully, but these errors were encountered: