From cd2d36b3278f2117af4d4bd9a8c7a3ceae126113 Mon Sep 17 00:00:00 2001 From: Severin Dicks <37635888+Intron7@users.noreply.github.com> Date: Fri, 10 Jun 2022 14:24:02 +0200 Subject: [PATCH] Update README.md --- README.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md index 1d731478..e0f721ef 100644 --- a/README.md +++ b/README.md @@ -8,7 +8,7 @@ The functions are analogous versions of functions that can be found within [scan To run the code in this repository you need a conda environment with rapids and scanpy installed. To use the full functionality of this repo please use `rapids-22.04`. You also need an Nvidia GPU. ``` -conda create -n rapids_singelcell -f conda/rapids_singecell.yml +conda env create -n rapids_singelcell -f conda/rapids_singecell.yml ipython kernel install --user --name=rapids_singelcell ``` After you set up the enviroment you can install this package from this wheel into the enviroment. The wheel doesn't install any dependencies @@ -16,7 +16,7 @@ After you set up the enviroment you can install this package from this wheel int pip install https://github.com/Intron7/rapids_singlecell/releases/download/v0.1.0/rapids_singlecell-0.1.0-py3-none-any.whl ``` -With this enviroment, you should be able to run the notebooks. So far I have only tested these Notebooks on a Quadro RTX 6000 and an RTX 3090. +With this enviroment, you should be able to run the notebooks. So far I have only tested these Notebooks on a Quadro RTX 6000, A100 80GB and an RTX 3090. ## Citation