Is there currently a way to plot 3D data?

[Marius1311]

I'm looking for even just the simplest case, i.e. fixing a z-location and visualizing x, y coordinates in 2D. I tried naively with spatialdata-plot, i.e. just

sdata.pl.render_images("image", channel="DAPI").pl.show(), but that fails with TypeError: Invalid shape (7, 9512, 9788) for image data.

[melonora]

Hi @Marius1311, currently that is not supported yet, but this is not hard to implement. I had some other priorities, but can pick this up. Sorry for the late reply!

[Marius1311]

Amazing, thanks! would be great to have this.