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The SpatialData object is not self-contained #710
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Hi, the problem here can be investigated by printing the
Basically, the images, labels and points that have been read still refer to the old Zarr location. To fix, you can simply read again the object from the new disk location.
Please let me know if you have additional questions on this! |
Hi, that's very clear, thank you very much for your reply! |
Hello,
I am contacting you about the “not self-contained” message when saving sdata to a new location.
Here is the example:
And it outputs :
I was wondering if in this case, if I completely delete test_blobs.zarr from my disk, can I lose information in test_2_blobs.zarr or have a problem afterwards? I am having trouble understanding the implications of being “not self-contained”.
Thanks in advance for your help!
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