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observation.md

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Table name: observation

Reading from pre_op__risk_index

Destination Field Source field Logic Comment field
observation_id session_startdate
id
Autogenerated running id by ascending order of session_startdate and id
person_id anon_case_no Joined with PERSON.PERSON_SOURCE_VALUE for PERSON.PERSON_ID
observation_concept_id high_risk_op
h_o_ihd
h_o_chf
h_o_cva
dm_on_insulin
hypertension
history_of_osa
loud_snoring
daytime_tiredness
apnoea
cpap_use
history_of_hypertension
history_of_motion_sickness
postop_nausea_smoking_history
Need standard concept ids for these observation from vocab mapping team
observation_date session_startdate
observation_datetime
observation_type_concept_id 32879 for Registry
value_as_number
value_as_string h_o_ihd
h_o_chf
h_o_cva
dm_on_insulin
hypertension
history_of_osa
loud_snoring
daytime_tiredness
apnoea
cpap_use
Put the string value of observation here
value_as_concept_id
qualifier_concept_id
unit_concept_id
provider_id
visit_occurrence_id session_id
visit_detail_id
observation_source_value high_risk_op
h_o_ihd
h_o_chf
h_o_cva
dm_on_insulin
hypertension
history_of_osa
loud_snoring
daytime_tiredness
apnoea
cpap_use
history_of_hypertension
history_of_motion_sickness
postop_nausea_smoking_history
Put the name of observation here
observation_source_concept_id
unit_source_value
qualifier_source_value
value_source_value high_risk_op
h_o_ihd
h_o_chf
h_o_cva
dm_on_insulin
hypertension
history_of_osa
loud_snoring
daytime_tiredness
apnoea
cpap_use
history_of_hypertension
history_of_motion_sickness
postop_nausea_smoking_history
Put the source value of observation here
observation_event_id
obs_event_field_concept_id

Reading from pre_op__others

Destination Field Source field Logic Comment field
observation_id session_startdate
id
Autogenerated running id by ascending order of session_startdate and id
person_id anon_case_no Joined with PERSON.PERSON_SOURCE_VALUE for PERSON.PERSON_ID
observation_concept_id forget_prescribed_medications
no_of_prior_hospital_admissions
continence
Need standard concept ids for these observation from vocab mapping team
observation_date session_startdate
observation_datetime
observation_type_concept_id 32879 for Registry
value_as_number
value_as_string forget_prescribed_medications
continence
no_of_prior_hospital_admissions
inhalation_burns
tbsa
Put the string value of observation here
value_as_concept_id
qualifier_concept_id
unit_concept_id
provider_id
visit_occurrence_id session_id
visit_detail_id
observation_source_value forget_prescribed_medications
no_of_prior_hospital_admissions
continence
inhalation_burns
tbsa
Put the name of observation here
observation_source_concept_id
unit_source_value
qualifier_source_value
value_source_value forget_prescribed_medications
no_of_prior_hospital_admissions
continence
inhalation_burns
tbsa
Put the source value of observation here
observation_event_id
obs_event_field_concept_id

Reading from pre_op__char

Destination Field Source field Logic Comment field
observation_id session_startdate
id
Autogenerated running id by ascending order of session_startdate and id
person_id anon_case_no Joined with PERSON.PERSON_SOURCE_VALUE for PERSON.PERSON_ID
observation_concept_id smoking_history
alcohol_consumption
pregnancy_gender
presence_of_malignancy
allergy_information
physical_general
physical_cardio
physical_respiratory
Need standard concept ids for these observation from vocab mapping team
observation_date session_startdate
observation_datetime
observation_type_concept_id 32879 for Registry
value_as_number
value_as_string smoking_history
pregnancy_gender
alcohol_consumption
presence_of_malignancy
Put the string value of observation here
value_as_concept_id allergy_information Put standard id for drug allergy here, e.g., 4241527 for Allergy to sulfonamide
qualifier_concept_id
unit_concept_id
provider_id
visit_occurrence_id session_id
visit_detail_id
observation_source_value smoking_history
alcohol_consumption
pregnancy_gender
presence_of_malignancy
allergy_information
physical_general
physical_cardio
physical_respiratory
Put the name of observation here
observation_source_concept_id
unit_source_value
qualifier_source_value
value_source_value allergy_information
smoking_history
alcohol_consumption
pregnancy_gender
presence_of_malignancy
physical_general
physical_cardio
physical_respiratory
Put the source value of observation here
observation_event_id
obs_event_field_concept_id

Reading from post_op__discharge

Destination Field Source field Logic Comment field
observation_id session_startdate
id
Autogenerated running id by ascending order of session_startdate and id
person_id anon_case_no
observation_concept_id days_postop Need standard concept ids for these observation from vocab mapping team
observation_date session_startdate
observation_datetime
observation_type_concept_id 32879 for Registry
value_as_number
value_as_string days_postop Put the string value of observation here
value_as_concept_id
qualifier_concept_id
unit_concept_id
provider_id
visit_occurrence_id session_id
visit_detail_id
observation_source_value days_postop Put the name of observation here
observation_source_concept_id
unit_source_value
qualifier_source_value
value_source_value days_postop Put the source value of observation here
observation_event_id
obs_event_field_concept_id

Reading from post_op__info

Destination Field Source field Logic Comment field
observation_id session_startdate
id
Autogenerated running id by ascending order of session_startdate and id
person_id anon_case_no
observation_concept_id postop_patient_satisfaction
satisfaction_at_analgesia_removal
Need standard concept ids for these observation from vocab mapping team
observation_date session_startdate
observation_datetime
observation_type_concept_id 32879 for Registry
value_as_number postop_patient_satisfaction
value_as_string satisfaction_at_analgesia_removal Put the string value of observation here
value_as_concept_id
qualifier_concept_id
unit_concept_id
provider_id
visit_occurrence_id session_id
visit_detail_id
observation_source_value postop_patient_satisfaction
satisfaction_at_analgesia_removal
Put the name of observation here
observation_source_concept_id
unit_source_value
qualifier_source_value
value_source_value postop_patient_satisfaction
satisfaction_at_analgesia_removal
Put the source value of observation here
observation_event_id
obs_event_field_concept_id

Reading from post_op__icu

Destination Field Source field Logic Comment field
observation_id session_startdate
id
Autogenerated running id by ascending order of session_startdate and id
person_id anon_case_no
observation_concept_id resuscitation_status Need standard concept ids for these observation from vocab mapping team
observation_date session_startdate
observation_datetime
observation_type_concept_id 32879 for Registry
value_as_number
value_as_string resuscitation_status Put the string value of observation here
value_as_concept_id
qualifier_concept_id
unit_concept_id
provider_id
visit_occurrence_id session_id
visit_detail_id
observation_source_value resuscitation_status Put the name of observation here
observation_source_concept_id
unit_source_value
qualifier_source_value
value_source_value resuscitation_status Put the source value of observation here
observation_event_id
obs_event_field_concept_id