From aca617f81cef0e0a11bb55e6c165d5e3507e7bc3 Mon Sep 17 00:00:00 2001 From: zhouyiqi91 <386346852@qq.com> Date: Fri, 21 Jun 2024 14:04:47 +0800 Subject: [PATCH] typo --- docs/usage.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/usage.md b/docs/usage.md index 3f5b25c..b8de516 100644 --- a/docs/usage.md +++ b/docs/usage.md @@ -36,7 +36,7 @@ manifest -m manifest.csv -f /workspaces/scrna_test_data/GEXSCOPE-V2 Recursively search the specified folders for fastq files and (optional) matched barcode files. -`-m --manifest` Path to the manifest CSV file containing mappings between fastq file prefixes and sample names. An example `manifest.csv` can be in the [test data repository](https://github.com/singleron-RD/sccite_test_data/tree/master/test1). +`-m --manifest` Path to the manifest CSV file containing mappings between fastq file prefixes and sample names. An example `manifest.csv` can be found in the [test data repository](https://github.com/singleron-RD/sccite_test_data/tree/master/test1). `-f --folders` Comma-separated paths to folders to search for fastq files. If `--match` is used, all `barcode.tsv.gz` files with sample name in the full path will also be searched.