From 5bc04e3336d7f7425a11e2d9654e4245549e2b09 Mon Sep 17 00:00:00 2001 From: "Filipe G. Vieira" <1151762+fgvieira@users.noreply.github.com> Date: Mon, 30 Sep 2024 15:09:15 +0200 Subject: [PATCH] Fix typos --- bio/seqkit/wrapper.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/bio/seqkit/wrapper.py b/bio/seqkit/wrapper.py index a1bc7f38fa..16dd34aae9 100644 --- a/bio/seqkit/wrapper.py +++ b/bio/seqkit/wrapper.py @@ -38,9 +38,9 @@ if snakemake.params.get("out_bgzip"): - input = input + " | bgzip --threads {snakemake.threads} > {snakemake.output[0]}" + input = input + f" | bgzip --threads {snakemake.threads} > {snakemake.output[0]}" else: - input = "--out-file {snakemake.output[0]} " + input + input = f"--out-file {snakemake.output[0]} " + input shell( "(seqkit {snakemake.params.command}"