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NEWS
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NEWS
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CHANGES IN VERSION 1.13.9
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CHANGES
o Fix bug in plot_fusion where the upstream ideogram was incorrect.
Ref https://github.com/stianlagstad/chimeraviz/issues/83
CHANGES IN VERSION 1.13.8
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CHANGES
o Support Aeron. Ref https://github.com/stianlagstad/chimeraviz/pull/81
CHANGES IN VERSION 1.13.7
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CHANGES
o Support SQUID. Ref https://github.com/stianlagstad/chimeraviz/pull/79
CHANGES IN VERSION 1.13.6
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CHANGES
o Change in plot_circle: Allow for mitochondria. Ref https://github.com/stianlagstad/chimeraviz/issues/80 and https://github.com/stianlagstad/chimeraviz/issues/18. Thank you to Philip Lijnzaad.
CHANGES IN VERSION 1.13.5
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CHANGES
o Change in create_fusion_report: Create the report in the current working directory. Ref https://github.com/stianlagstad/chimeraviz/issues/66
CHANGES IN VERSION 1.13.4
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CHANGES
o Support ChimPipe. Ref https://github.com/stianlagstad/chimeraviz/pull/77
CHANGES IN VERSION 1.9.5
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CHANGES
o Allow calling plot_fusion without bam/bedfile. Ref https://github.com/stianlagstad/chimeraviz/issues/61
CHANGES IN VERSION 1.9.1
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CHANGES
o Fixed a bug in plot_circle where link widths were off. Ref https://github.com/stianlagstad/chimeraviz/issues/52
CHANGES IN VERSION 1.7.1
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CHANGES
o Introduced support for oncofuse. Ref https://github.com/stianlagstad/chimeraviz/issues/47 and https://github.com/stianlagstad/chimeraviz/pull/48/files.
CHANGES IN VERSION 1.5.6
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CHANGES
o The interface for working with chimeraviz has changed to comply with https://github.com/jimhester/lintr. chimeraviz is the same as before, but methods have new names.
CHANGES IN VERSION 1.5.1
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NEW FEATURES
o Added support for the mm10 genome.
CHANGES IN VERSION 1.2.3
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NEW FEATURES
o Added the protein domain plot to show which protein domains are retained in the fusion.
BUG FIXES
o Fixed a bug in plotFusionReads where too many supporting reads would lead to an error.