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viewer_export.xml
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<?xml version="1.0" encoding="UTF-8" standalone="no"?>
<project default="distro-binary" name="Create Runnable Jar for Project MetaProteomeAnalyzer">
<!-- Default property values, if not overridden elsewhere: -->
<property name='build' location="${user.home}/mpa-viewer" /> <property name='app.version' value='1.0.4'/>
<property name='app.name' value='MPA Viewer'/>
<property name='distro-name' value='mpa-viewer-${app.version}'/>
<target name='clean' description="Delete all build artifacts." >
<delete dir='${build}'/>
</target>
<target name="jar">
<jar destfile="${build}/${distro-name}.jar" filesetmanifest="mergewithoutmain">
<manifest>
<attribute name="Main-Class" value="de.mpa.main.Starter"/>
<attribute name="Class-Path" value="."/>
</manifest>
<fileset dir="/scratch/workspace2/MetaProteomeAnalyzer/bin"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/junit-4.9.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/jgoodies-forms-1.5.0.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/jgoodies-common-1.3.0.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/commons-codec-1.6.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/swingx-all-1.6.4.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/jcommon-1.0.16.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/balloontip-1.2.1.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/mysql-connector-java-5.1.20-bin.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/aopalliance.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/commons-httpclient.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/commons-logging.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/spring.aop.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/spring.beans.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/spring.context.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/spring.core.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/spring.web.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/log4j-1.2.17.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/swing-layout-1.0.3.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/keggapi.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/jaxrpc.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/axis.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/commons-discovery-0.2.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/wsdl4j-1.5.1.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/jfreechart-1.0.14.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/jaligner.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/trove-3.0.3.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/blueprints-core-2.2.0.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/blueprints-neo4j-graph-2.2.0.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/frames-2.2.0.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/geronimo-jta_1.1_spec-1.1.1.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/lucene-core-3.5.0.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/neo4j-cypher-1.8.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/neo4j-graph-algo-1.8.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/neo4j-graph-matching-1.8.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/neo4j-jmx-1.8.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/neo4j-kernel-1.8.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/neo4j-lucene-index-1.8.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/org.apache.servicemix.bundles.jline-0.9.94_1.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/neo4j-shell-1.8.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/neo4j-udc-1.8.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/scala-library-2.9.1-1.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/server-api-1.8.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/mascotdatfile-3.4.6.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/jgoodies-looks-2.5.3.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/xstream-1.4.4.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/ColorPicker.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/omssa-parser-1.6.1.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/utilities-3.17.7.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/xpp3-1.1.4c.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/xtandem-parser-1.7.5.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/commons-lang3-3.3.2.jar"/>
<zipfileset excludes="META-INF/*.SF" src="/scratch/workspace2/MetaProteomeAnalyzer/lib/uniprotjapi-2015-5.jar"/>
</jar>
</target>
<target name="distro-binary" description="Create zip file with executable jar, docs." depends="clean, jar">
<zip destfile="${build}/${distro-name}.zip" duplicate="preserve">
<zipfileset dir="${build}/" includes="${distro-name}.jar" prefix="${distro-name}/"/>
<zipfileset dir="src/conf" excludes="server-settings.txt, connection-settings.txt, connection-settings_default.txt, client-settings.txt, client-settings_default.txt" prefix="${distro-name}/conf/"/>
<zipfileset file="built/README_Viewer.txt" fullpath="${distro-name}/README_Viewer.txt"/>
<zipfileset file="built/mpa-viewer.bat" fullpath="${distro-name}/mpa-viewer.bat"/>
<zipfileset file="built/mpa-viewer.sh" fullpath="${distro-name}/mpa-viewer.sh"/>
</zip>
<delete file='${build}/${distro-name}.jar'/>
</target>
</project>