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Source.php
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<?php
namespace Stanford\MirrorSourceDataModule;
use REDCap;
/**
* Class Source
* @package Stanford\MirrorSourceDataModule
* @property int $projectId
* @property \Project $project
* @property int $eventId
* @property array $dags
* @property array $record
* @property string $recordId
* @property string $instrument
* @property string $eventName
* @property string $primaryKey
* @property string $PREFIX
* @property array $migrationFields
* @property boolean $updateNotes
* @property string $surveyField
*
*/
class Source
{
use emLoggerTrait;
private $projectId;
private $project;
private $eventId;
private $dags;
private $record;
private $recordId;
private $instrument;
private $eventName;
private $primaryKey;
public $PREFIX;
private $surveyField;
/**
* if source is mirroring to multiple destination projects. when changing destination object check if want to update the notes for source based on previous destination status
* @var
*/
public $canUpdateNotes;
private $migrationFields;
/**
* Source constructor.
* @param $projectId
* @param $eventId
* @param null $recordId
* @param null $instrument
* @param null $dags
*/
public function __construct($projectId, $eventId, $prefix, $recordId = null, $instrument = null, $dags = null)
{
$this->setProjectId($projectId);
$this->setEventId($eventId);
$this->setEventName(\REDCap::getEventNames(true, true, $this->getEventId()));
$this->setProject(new \Project($this->getProjectId()));
$this->setPrimaryKey($this->getProject()->table_pk);
if (!is_null($recordId)) {
$this->setRecordId($recordId);
}
if (!is_null($instrument)) {
$this->setInstrument($instrument);
}
if (!is_null($dags)) {
$this->setDags($dags);
}
/**
* this public so we do not have to modify emLoggerTrait
*/
$this->PREFIX = $prefix;
}
/**
* Bubble up status to user via the timestamp and notes field in the source form
* in config file as 'migration-notes'
* @param $config : config fields for migration module
* @param $msg : Message to enter into Notes field
* @param $source_data : If destination migration successful, data about migration to destination (else leave as null)
* @return bool : return fail/pass status of save data
*/
public function updateNotes($config, $msg, $source_data = array())
{
//$this->emLog($source_data, "DEBUG", "RECEIVED THIS DATA");
$source_data[$this->getPrimaryKey()] = $this->getRecordId();
if (isset($config['migration-notes'])) {
$source_data[$config['migration-notes']] = $msg;
}
// Don't overwrite the redirect url if it was just set!
if(!empty($config['field-to-save-destination-survey-url'])) {
unset($source_data[$config['field-to-save-destination-survey-url']]);
}
if (!empty($config['source-event-name'])) {
//assuming that current event is the right event
//$this->emLog("Event name from REDCap::getEventNames : $source_event / EVENT name from this->redcap_event_name: ".$this->redcap_event_name);
$source_data['redcap_event_name'] = $this->getEventName(); //$config['source-event-name'];
}
/**
//This works, why is change broken?
$this->emLog($source_data, "Saving Source Data");
$result = REDCap::saveData(
$this->getProjectId(),
'json',
json_encode(array($source_data)),
'overwrite');
*
*/
$params = [
"project_id" => $this->getProject(),
"dataFormat" => 'json',
"data" => json_encode(array($source_data)),
"overwriteBehavior" => 'overwrite'
];
$result = REDCap::saveData($params);
//$this->emLog($source_data, "Saving Source Data");
// Check for upload errors
if (!empty($result['errors'])) {
$msg = "Error creating record in SOURCE project " . $this->getProjectId() . " - ask administrator to review logs: " . json_encode($result) . " - " . json_encode($params);
//$sr->updateFinalReviewNotes($msg);
//todo: bubble up to user : should this be sent to logging?
$this->emError($msg);
// $this->emError("RESULT OF SOURCE: " . print_r($result, true));
$this->emError("RESULT OF SOURCE: ");
//logEvent($description, $changes_made="", $sql="", $record=null, $event_id=null, $project_id=null);
REDCap::logEvent("Mirror Source Data Module", $msg, null, $this->getRecordId(),
$config['source-event-name']);
return false;
}
}
public function saveSurveyURL($config, $link)
{
if (!$this->getSurveyField()) {
$this->updateNotes($config,
'Destination survey option is defined but no field in source defined to save the survey url. ');
} else {
$data[$this->getSurveyField()] = $link;
$data[REDCap::getRecordIdField()] = $this->getRecordId();
// $this->emLog($data, "Saving Source Survey Link");
$this->emLog("Saving Source Survey Link");
$result = REDCap::saveData(
$this->getProjectId(),
'json',
json_encode(array($data)),
'overwrite');
// Check for upload errors
if (!empty($result['errors'])) {
$this->updateNotes($config,
'Destination survey option is defined but no field in source defined to save the survey url. ');
return false;
}
}
}
/**
* @return array
*/
public function getMigrationFields()
{
return $this->migrationFields;
}
/**
* based on configuration find out the field will be migrated from source project into destination project
* @param $config
* @param \Stanford\MirrorSourceDataModule\Destination $destination
*/
public function setMigrationFields($config, $destination)
{
$arrFields = array();
//branching logic reset does not clear out old values - force clear here
switch ($config['fields-to-migrate']) {
case 'migrate-intersect':
//get source instrument for current event
$sourceFields = $this->getProjectFields($this);
$destinationFields = $this->getProjectFields($destination);
$arrFields = array_intersect($sourceFields, $destinationFields);
break;
case 'migrate-intersect-specified':
//get source instrument for current event
$sourceFields = $this->getProjectFields($this);
$destinationFields = $this->getProjectFields($destination);
//get all fields
$arrFields = array_intersect($sourceFields, $destinationFields);
//intersect with included only.
$arrFields = array_intersect($arrFields, $config['include-only-fields']);
break;
case 'migrate-destination-form':
$sourceFields = array_keys($destination->getProject()->forms[$config['include-only-form-destination']]['fields']);
//remove last field which is complete because its does not exist in the destination project
$sourceFields = $this->removeLastField($sourceFields);
$destinationFields = $this->getProjectFields($destination);
$arrFields = array_intersect($sourceFields, $destinationFields);
break;
case 'migrate-source-form':
$sourceFields = array_keys($this->getProject()->forms[$config['include-only-form-source']]['fields']);
//remove last field which is complete because its does not exist in the source project
$sourceFields = $this->removeLastField($sourceFields);
$destinationFields = $this->getProjectFields($destination);
$arrFields = array_intersect($sourceFields, $destinationFields);
break;
}
//lastly remove exclude fields if specified
if (count($config['exclude-fields']?:[]) > 0) {
$arrFields = $this->removeExcludedFields($arrFields, $config);
}
$this->migrationFields = $arrFields;
}
/**
* @param $arrFields
* @param $config
* @return mixed
*/
private function removeExcludedFields($arrFields, $config)
{
$diff = array_intersect($config['exclude-fields'], $arrFields);
foreach ($diff as $element) {
$key = array_search($element, $arrFields);
if ($key) {
unset($arrFields[$key]);
}
}
reset($arrFields);
//$this->emDebug($arrFields, 'EXCLUDED arr_fields:');
return $arrFields;
}
/**
* @param Source | Destination $project
*/
private function getProjectFields($project)
{
/**
* if event is defined use it otherwise use first event ID
*/
if ($project->getEventId()) {
$instruments = $project->getProject()->eventsForms[$project->getEventId()];
} else {
$instruments = current($project->getProject()->eventsForms);
}
$result = array();
foreach ($instruments as $instrument) {
$fields = array_keys($project->getProject()->forms[$instrument]['fields']);
if (empty($result)) {
$result = $fields;
} else {
$result = array_merge($result, $fields);
}
}
return $result;
}
/**
* @param $fields
* @return mixed
*/
private function removeLastField($fields)
{
$length = count($fields) - 1;
unset($fields[$length]);
return $fields;
}
/**
* @return int
*/
public function getProjectId()
{
return $this->projectId;
}
/**
* @param int $projectId
*/
public function setProjectId($projectId)
{
$this->projectId = $projectId;
}
/**
* @return \Project
*/
public function getProject()
{
return $this->project;
}
/**
* @param \Project $project
*/
public function setProject($project)
{
$this->project = $project;
}
/**
* @return int
*/
public function getEventId()
{
return $this->eventId;
}
/**
* @param int $eventId
*/
public function setEventId($eventId)
{
$this->eventId = $eventId;
}
/**
* @return array
*/
public function getDags()
{
return $this->dags;
}
/**
* @param array $dags
*/
public function setDags($dags)
{
$this->dags = $dags;
}
/**
* @return array
*/
public function resetRecord()
{
$this->record = null;
}
/**
* @return array
*/
public function getRecord()
{
if ($this->record) {
return $this->record;
} else {
$this->setRecord();
return $this->record;
}
}
/**
* @param array $record
*/
public function setRecord()
{
//4. Get data from source to be saved on destination
//set source record based on selected fields
$results = REDCap::getData('json', $this->getRecordId(), $this->getMigrationFields(),
$this->getEventName());
$results = json_decode($results, true);
$this->record = end($results);
}
/**
* @return string
*/
public function getRecordId()
{
return $this->recordId;
}
/**
* @param string $recordId
*/
public function setRecordId($recordId)
{
$this->recordId = $recordId;
}
/**
* @return string
*/
public function getInstrument()
{
return $this->instrument;
}
/**
* @param string $instrument
*/
public function setInstrument($instrument)
{
$this->instrument = $instrument;
}
/**
* @return string
*/
public function getEventName()
{
return $this->eventName;
}
/**
* @param string $eventName
*/
public function setEventName($eventName)
{
$this->eventName = $eventName;
}
/**
* @return string
*/
public function getPrimaryKey()
{
return $this->primaryKey;
}
/**
* @param string $primaryKey
*/
public function setPrimaryKey($primaryKey)
{
$this->primaryKey = $primaryKey;
}
/**
* @return string
*/
public function getSurveyField()
{
return $this->surveyField;
}
/**
* @param string $surveyField
*/
public function setSurveyField($surveyField)
{
$this->surveyField = $surveyField;
}
}