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Extracting overall percent alignment from the MSA #2

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Jigyasa3 opened this issue Jan 23, 2025 · 1 comment
Open

Extracting overall percent alignment from the MSA #2

Jigyasa3 opened this issue Jan 23, 2025 · 1 comment

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@Jigyasa3
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Dear @tomaszwozniakihg and @MSajek ,

Thank you for a great tool! I am interested in examining the overall percent alignment from the RNA secondary structure based MSA. Is it possible to extract that from the output?

Looking forward to your reply.
Regards,
Jigyasa
@MSajek
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MSajek commented Jan 23, 2025

Dear Jigyasa,
Can you explain how you want to calculate overall percent alignment?
Best,
Marcin

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@Jigyasa3 @MSajek