Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

The example nestedTrackingFromOverlap" no longer works with ParaView 5.13 #1055

Open
julien-tierny opened this issue Sep 12, 2024 · 0 comments

Comments

@julien-tierny
Copy link
Collaborator

Describe the bug
The example nestedTrackingFromOverlap" no longer works with ParaView 5.13:

To Reproduce
Follow the instructions from the online example (paraview + python):
https://topology-tool-kit.github.io/examples/nestedTrackingFromOverlap/

Expected behavior
Behavoir described in the online example.

Screenshots

python python/nestedTrackingFromOverlap.py 
[Common]                            ▒▒▒▒▒▒▒▒▒▒▒▒▒▒░
[Common]                     ▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░
[Common]                 ▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒
[Common]              ▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░░▒░░░▒▒░░░▒▒▒▒▒▒▒
[Common]           ▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░░░░░░   ░░░░░░░░░░░▒▒▒▒▒▒▒
[Common]         ▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░░                    ░░░░░░░▒▒▒
[Common]       ▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░░    ▒▒▒▒▒▒▒▒▒▒▒▒          ░▒▒ ░░▒▒▒
[Common]      ▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░   ▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░▒▒       ░░▒ ░░▒▒
[Common]     ▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░  ▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░▒▒    ░░░░▒ ░░▒▒
[Common]    ▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░ ▒▒▒▒▒▒▒▒▒▒▒▒▄▓██▓█████▓▄▄░░░▒   ░░░░░░░░░▒
[Common]   ▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░  ▒▒▒▒▒▒▒▒▒▓▓▓▀▀▀▀▀▀▀████▓▓▓▓▄░░   ░░░░░▒ ░░▒
[Common]  ▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░ ▒▒▒▒▒▒▒▒▒           ░░░▀██▓▓▓▓▓░░    ░░░▒ ░░▒
[Common]  ▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░ ▒▒▒▒▒▒                  ░▀██▓▓▓▓░    ░░░░▒ ░░░
[Common]  ▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░▒░░ ▒▒▒                     ░░▀▓▓▓▓▒░    ░░░▒░░░▒
[Common]  ▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░░ ▒▒                        ░▐▓▓▓▒▒    ░░░░▒ ░░
[Common]  ░▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░                         ░░░▐▓▓▒▒▒ ░░░░░▒▒ ░░▒
[Common] ░▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░                        ░░░▐▓▒▒▒░░░░░░░▒▒ ░░▒
[Common] ░░░▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░                   ░░░░░░▐▓▒▒▒░░░░░░░▒▒ ░░
[Common]   ░▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░░░           ░░░░░░▒▒░▓▒▒▒░░░░░░░▒▒▒░░░
[Common]    ░▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░░░░░░░░░░░░░░░ ▓▒▒░░░░░░▒▒▒▒▒░░░
[Common]     ░░▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░░░░░░░░▒░░░▓▒▒░▒░░▒▒▒▒▒▒▒░░░
[Common]      ░░▒▒▒▒▒▒▒▒▒▒▒▒▓▓▓▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░ ▓▒░ ▒▒▒▒▒▒▒▒▒▒▒░░▒
[Common]       ▒░░░▒▒▒▒▒▒▒▒▒▒▓▓▓▓▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░░ ▒▒  ▒▒▒▒▒▒▒▒▒▒▒░░░
[Common]       ░░░░░▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░░ ▒▒   ▒▒▒▒▒▒▒▒▒▒▒░░░
[Common]        ░░░░░░░░▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░░░░▒     ▒▒▒▒▒▒▒▒▒▒▒░░░
[Common]          ▒░░░░░░░░░░▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒░░░░░ ░       ░▒▒▒▒▒▒▒▒▒▒░░░
[Common]           ░░░░░░░░░░░░░░░░░░░░░░░░░░░            ▒▒▒▒▒▒▒▒▒▒░░░
[Common]             ░▒░░░░░░░░░░                       ▒▒▒▒▒▒▒▒▒▒░░░
[Common]               ░▒░░░░░░░░░░░░░░░░░░░░░░░░░░░░ ░▒▒▒▒▒▒▒▒░░░░
[Common]                  ░░▒░░░░░░░░░░░░░░░░░░░░░░░▒▒▒▒▒▒▒▒░░░░
[Common]                       ░░▒░░░░░░░░░░░░░░░▒▒▒▒▒▒░░░░░
[Common]                               ░░░░░░░░░░░░░▒░
[Common]  _____ _____ _  __                   __  __    ____   ___ ____  _  _
[Common] |_   _|_   _| |/ /                  / /__\ \  |___ \ / _ \___ \| || |
[Common]   | |   | | | ' /                  | |/ __| |   __) | | | |__) | || |_
[Common]   | |   | | | . \                  | | (__| |  / __/| |_| / __/|__   _|
[Common]   |_|   |_| |_|\_\                 | |\___| | |_____|\___/_____|  |_|
[Common]                                     \_\  /_/
[Common] Welcome!
[CinemaReader] %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
[CinemaReader] Database    : ViscousFingers.cdb
[CinemaReader] FILE Columns: FILE              
[CinemaReader] =================================================================
[CinemaReader] Reading CSV file .................................. [0.001s|100%]
[CinemaReader] -----------------------------------------------------------------
[CinemaReader] Complete (#rows: 214) ............................. [0.001s|100%]
[CinemaReader] =================================================================
[CinemaQuery] %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
[CinemaQuery] Converting input VTK tables to SQL tables .......... [0.000s|100%]
[CinemaQuery] ==================================================================
[CinemaQuery] SELECT * FROM InputTable0
[CinemaQuery] WHERE Sim='run01'
[CinemaQuery] ORDER BY Time
[CinemaQuery] LIMIT 100 OFFSET 20
[CinemaQuery] ==================================================================
[CinemaQuery] Creating inmemory database ......................... [0.001s|100%]
[CinemaQuery] Querying database .................................. [0.000s|100%]
[CinemaQuery] Closing database ................................... [0.000s|100%]
[CinemaQuery] Converting SQL result to VTK table ................. [0.000s|100%]
[CinemaQuery] ------------------------------------------------------------------
[CinemaQuery] Complete (#rows: 79) ............................... [0.001s|100%]
[CinemaQuery] ==================================================================
[ForEach] %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
[ForEach] [R] Iteration: ( 0 / 78 )  ///////////////////////////////////////////
[ForEach] ======================================================================
[ForEach] Extraction Mode: Rows
[ForEach] Indices        : [0] 
[ForEach] ----------------------------------------------------------------------
[ForEach] Extracting rows [0] .................................... [0.000s|100%]
[ForEach] ======================================================================
[CinemaProductReader] %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
[CinemaProductReader] #Files     : 1   
[CinemaProductReader] FILE Column: FILE
[CinemaProductReader] ==========================================================
[CinemaProductReader] Reading (1/1): "021_density_021_064_2.0.vti"  [0.006s|100%]
[CinemaProductReader] ----------------------------------------------------------
[CinemaProductReader] Complete (#products: 1) .................... [0.006s|100%]
[CinemaProductReader] ==========================================================
[BlockAggregator] %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
[BlockAggregator] Adding object at block index 0 ................. [0.000s|100%]
[BlockAggregator] %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
[BlockAggregator] Adding object at block index 0 ................. [0.000s|100%]
[BlockAggregator] %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
[BlockAggregator] Adding object at block index 0 ................. [0.000s|100%]
[BlockAggregator] %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
[BlockAggregator] Adding object at block index 0 ................. [0.000s|100%]
[BlockAggregator] Adding object at block index 1 ................. [0.000s|100%]
[BlockAggregator] Adding object at block index 2 ................. [0.000s|100%]
[ArrayEditor] %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
[ArrayEditor] Adding point/cell/field arrays from source ......... [0.000s|100%]
[TrackingFromOverlap] %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
[TrackingFromOverlap] ===================================================================
[TrackingFromOverlap] RequestData
[TrackingFromOverlap] =======================================================
[TrackingFromOverlap] Computing nodes
[TrackingFromOverlap] -------------------------------------------------------
[TrackingFromOverlap] Level Index: 0
[TrackingFromOverlap] Identifying nodes ..... 
Segmentation fault

System (please complete the following information):

  • OS: [e.g. iOS] gentoo
  • Compiler [e.g. 22] gcc 12
  • Installed TTK's optional dependencies all

Additional context
This one is for @JonasLukasczyk
PV513 introduced some changes that seem to upset the filter TrackingFromOverlap.
I will disable this test from the CI until this is fixed.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant