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DESCRIPTION
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Package: antibioticR
Type: Package
Title: Analysis of Antibiotic Resistance Data
Version: 0.3.3
Date: 2021-09-22
Author: Thomas Petzoldt
Encoding: UTF-8
Maintainer: Thomas Petzoldt <[email protected]>
Description: Antibiotic resistant bacteria are a serious threat to human health.
This package aims to collect tools and functions to analyze environmental resistance
data, especially minimal inhibitory concentration ('MIC') and inhibition zone
diameters ('ZD').
License: GPL (>= 2)
RoxygenNote: 7.1.1
Depends: reshape2, methods
Imports: bbmle, evmix
Suggests: knitr, dplyr, ggplot2, shiny, rhandsontable, rmarkdown
VignetteBuilder: knitr
Collate:
'antibioticR-package.R'
'ECOFFinder.R'
'aaa_oldclasses.R'
'abr_baseclass.R'
'abr_densfunctions.R'
'abr_methods.R'
'abr_quantile.R'
'abr_summary.R'
'antibioticR-internal.R'
'ecoffinder-internal-plot-decoff.R'
'ecoffinder-internal-plot-pecoff.R'
'ecoffinder-plot-methods.R'
'ecoffinder_nls.R'
'ecoffinder_startpar.R'
'fit_unimix.R'
'micdata.R'
'mixParmDf2parmlist.R'
'mxObj-class.R'
'mxObj-methods.R'
'mxObj-coerce.R'
'mx_compare.R'
'mx_diagnostics.R'
'mx_guess_components.R'
'mx_metafit.R'
'mx_parmlist_sort.R'
'mx_plot.R'
'mx_results.R'
'parmList.R'
'peakwindow.R'
'reformat_eucast.R'
'turnpoints.R'
'unbin.R'
'unimix-distributions-internal.R'
'unimix-methods.R'
'utilities-internal.R'
'weighted.sd.R'
'zd_main_components.R'