diff --git a/.github/releases/dragen-wts-qc-pipeline__4.2.4__20240830041140/workflow.svg b/.github/releases/dragen-wts-qc-pipeline__4.2.4__20240830041140/workflow.svg new file mode 100644 index 00000000..1c4239a2 --- /dev/null +++ b/.github/releases/dragen-wts-qc-pipeline__4.2.4__20240830041140/workflow.svg @@ -0,0 +1,269 @@ + + + + + + +G + + +cluster_inputs + +Workflow Inputs + + +cluster_outputs + +Workflow Outputs + + + +run_dragen_transcriptome_step + +dragen-transcriptome v(4.2.4) + + + +run_qualimap_step + +qualimap v(2.2.2) + + + +run_dragen_transcriptome_step->run_qualimap_step + + + + + +dragen_transcriptome_output_directory + +dragen_transcriptome_output_directory + + + +run_dragen_transcriptome_step->dragen_transcriptome_output_directory + + + + + +qualimap_output_directory + +qualimap_output_directory + + + +run_qualimap_step->qualimap_output_directory + + + + + +annotation_file + +annotation_file + + + +annotation_file->run_dragen_transcriptome_step + + + + + +annotation_file->run_qualimap_step + + + + + +bam_input + +bam_input + + + +bam_input->run_dragen_transcriptome_step + + + + + +enable_duplicate_marking + +enable_duplicate_marking + + + +enable_duplicate_marking->run_dragen_transcriptome_step + + + + + +enable_map_align + +enable_map_align + + + +enable_map_align->run_dragen_transcriptome_step + + + + + +enable_map_align_output + +enable_map_align_output + + + +enable_map_align_output->run_dragen_transcriptome_step + + + + + +enable_rna_gene_fusion + +enable_rna_gene_fusion + + + +enable_rna_gene_fusion->run_dragen_transcriptome_step + + + + + +enable_rna_quantification + +enable_rna_quantification + + + +enable_rna_quantification->run_dragen_transcriptome_step + + + + + +enable_sort + +enable_sort + + + +enable_sort->run_dragen_transcriptome_step + + + + + +fastq_list + +fastq_list + + + +fastq_list->run_dragen_transcriptome_step + + + + + +fastq_list_rows + +fastq_list_rows + + + +fastq_list_rows->run_dragen_transcriptome_step + + + + + +lic_instance_id_location + +lic_instance_id_location + + + +lic_instance_id_location->run_dragen_transcriptome_step + + + + + +output_directory + +output_directory + + + +output_directory->run_dragen_transcriptome_step + + + + + +output_directory->run_qualimap_step + + + + + +output_file_prefix + +output_file_prefix + + + +output_file_prefix->run_dragen_transcriptome_step + + + + + +reference_tar + +reference_tar + + + +reference_tar->run_dragen_transcriptome_step + + + + + +algorithm + +algorithm + + + +algorithm->run_qualimap_step + + + + + +java_mem + +java_mem + + + +java_mem->run_qualimap_step + + + + +