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Fail to realize it #160

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xiaowangfeng opened this issue Jun 30, 2024 · 1 comment
Open

Fail to realize it #160

xiaowangfeng opened this issue Jun 30, 2024 · 1 comment

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@xiaowangfeng
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I am sorry to bother you again.
when i try to realize it again, but it fail
this is my package:
alignn 2024.5.27
annotated-types 0.7.0
ase 3.23.0
certifi 2024.6.2
charset-normalizer 3.3.2
colorama 0.4.6
contourpy 1.2.1
cycler 0.12.1
dgl 2.2.1
filelock 3.15.4
flake8 7.1.0
fonttools 4.53.0
fsspec 2024.6.1
idna 3.7
inflect 7.3.0
intel-openmp 2021.4.0
jarvis-tools 2024.5.10
Jinja2 3.1.4
joblib 1.4.2
kiwisolver 1.4.5
lmdb 1.4.1
MarkupSafe 2.1.5
matplotlib 3.9.0
mccabe 0.7.0
mkl 2021.4.0
more-itertools 10.3.0
mpmath 1.3.0
networkx 3.3
numpy 1.26.4
packaging 24.1
pandas 2.2.2
pillow 10.3.0
pip 24.0
psutil 6.0.0
pycodestyle 2.12.0
pydantic 2.7.4
pydantic_core 2.18.4
pydantic-settings 2.3.4
pydocstyle 6.3.0
pyflakes 3.2.0
pyparsing 2.4.7
python-dateutil 2.9.0.post0
python-dotenv 1.0.1
pytz 2024.1
PyYAML 6.0.1
requests 2.32.3
scikit-learn 1.5.0
scipy 1.14.0
setuptools 69.5.1
six 1.16.0
snowballstemmer 2.2.0
spglib 2.4.0
sympy 1.12.1
tbb 2021.13.0
threadpoolctl 3.5.0
toolz 0.12.1
torch 2.2.1
torchdata 0.7.1
tqdm 4.66.4
typeguard 4.3.0
typing_extensions 4.12.2
tzdata 2024.1
urllib3 2.2.2
wheel 0.43.0
xmltodict 0.13.0

when i run python train_alignn.py --root_dir "alignn/examples/sample_data" --config "alignn/examples/sample_data/config_example.json" --output_dir=temp
it will come to FileNotFoundError: [Errno 2] No such file or directory: 'alignn/examples/sample_data/config_example.json' ,but i am sure that i have the file . i don't know what happened. could you tell me which version will work?
thank you very much

@bdecost
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bdecost commented Jul 1, 2024

this error message says that the example files are not at the relative path you are specifying alignn/examples/sample_data/

can you please verify that you are running the python script from the top level of the alignn repository like in #158 ? And that the example files actually exist at that relative path?

Alternatively you can use absolute paths for the --root_dir and --config arguments if you

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