diff --git a/.devcontainer/Dockerfile b/.devcontainer/Dockerfile deleted file mode 100644 index f0b5be3..0000000 --- a/.devcontainer/Dockerfile +++ /dev/null @@ -1,25 +0,0 @@ -FROM golang:1.23.2-bullseye AS builder - -RUN apt-get update && apt-get install -y \ - build-essential \ - uuid-dev \ - libgpgme-dev \ - squashfs-tools \ - libseccomp-dev \ - wget \ - pkg-config \ - git \ - cryptsetup-bin - -ARG APPTAINER_COMMITISH="main" -ARG MCONFIG_OPTIONS="--without-suid" -WORKDIR $GOPATH/src/github.com/apptainer -RUN git clone https://github.com/apptainer/apptainer.git \ - && cd apptainer \ - && git checkout "$APPTAINER_COMMITISH" \ - && ./mconfig $MCONFIG_OPTIONS -p /opt/apptainer \ - && cd builddir \ - && make \ - && make install - -RUN ln -s /opt/apptainer/bin/apptainer /usr/local/bin/apptainer diff --git a/.devcontainer/Dockerfile.R b/.devcontainer/Dockerfile.R deleted file mode 100644 index 093ce79..0000000 --- a/.devcontainer/Dockerfile.R +++ /dev/null @@ -1,31 +0,0 @@ -# Base Image -FROM rocker/r-ver:4.3.0 - -# Install system dependencies -RUN apt-get update && \ - apt-get install -y --no-install-recommends \ - libudunits2-dev \ - libgdal-dev \ - libcurl4-openssl-dev \ - libssl-dev \ - libxml2-dev \ - libproj-dev \ - build-essential \ - git \ - curl && \ - rm -rf /var/lib/apt/lists/* - -# Set working directory to /app -WORKDIR /app - -# Copy the R package or the current directory into the container -COPY . /app - -# Install R package dependencies -RUN R -e "install.packages(c('devtools', 'roxygen2', 'testthat'))" - -# Install the R package -RUN R -e "devtools::install('.', dependencies=TRUE, keep_source=TRUE)" - -# Default command -CMD ["R"] diff --git a/.devcontainer/devcontainer.json b/.devcontainer/devcontainer.json deleted file mode 100644 index a310761..0000000 --- a/.devcontainer/devcontainer.json +++ /dev/null @@ -1,22 +0,0 @@ -// For format details, see https://aka.ms/devcontainer.json. For config options, see the -{ - "build": { - "dockerfile": "Dockerfile", - "context": ".." - }, - "customizations": { - "vscode": { - "extensions": [ - "ms-toolsai.jupyter", - "ms-python.python", - "REditorSupport.r" - ] - } - }, - "hostRequirements": { - "cpus": 4, - "memory": "16gb", - "storage": "32gb" - }, - "postCreateCommand": "sh .devcontainer/postBuild.sh" -} diff --git a/.devcontainer/postBuild.sh b/.devcontainer/postBuild.sh deleted file mode 100644 index e69de29..0000000