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DESCRIPTION
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Package: ConQuR
Type: Package
Title: Batch Effects Removal for Microbiome Data in Large-Scale Epidemiology Studies via Conditional Quantile Regression
Version: 2.0
Author: Wodan Ling and Michael C. Wu
Maintainer: Wodan Ling <[email protected]>
Description: This package conducts batch effects removal from a taxa read count table by a conditional quantile regression method. The distributional attributes of microbiome data - zero-inflation and over-dispersion, are simultaneously considered.
License: GPL-3.0
Encoding: UTF-8
LazyData: true
NeedsCompilation: no
Imports: quantreg, cqrReg, glmnet, dplyr, doParallel, gplots, vegan, ade4, compositions, randomForest, ROCR, ape, GUniFrac, fastDummies
RoxygenNote: 7.1.1
Suggests:
knitr,
rmarkdown
VignetteBuilder: knitr
Depends:
R (>= 3.5.0)