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Hi,
I'm using run_infer.py to make inference on tiles.
After run script run_infer.py, I got output json and mat file.
But I found that the number of nuclei is not continues in json and mat file.
There's not 315 after 314.
It seems like fig below.
Is that a normal phenomenon?
I wonder if anyone could help me.
Thanks a lot.
I use command as below:
python3 /home/lzh/colon/hovernet/hover_net-master/run_infer.py --gpu=0 --nr_types=6
--type_info_path=/home/lzh/colon/hovernet/hover_net-master/type_info.json --batch_size=16 --model_mode=fast
--model_path=/home/lzh/colon/hovernet/pretrained-model/hovernet_fast_pannuke_type_tf2pytorch.tar --nr_inference_workers=8
--nr_post_proc_workers=8 tile --input_dir=/home/lzh/colon/colon-tiles/id --output_dir=/work/lzh/colon/colon-inference/id
--draw_dot
The text was updated successfully, but these errors were encountered:
Hi,
I'm using run_infer.py to make inference on tiles.
After run script run_infer.py, I got output json and mat file.
But I found that the number of nuclei is not continues in json and mat file.
There's not 315 after 314.
It seems like fig below.
Is that a normal phenomenon?
I wonder if anyone could help me.
Thanks a lot.
I use command as below:
python3 /home/lzh/colon/hovernet/hover_net-master/run_infer.py --gpu=0 --nr_types=6
--type_info_path=/home/lzh/colon/hovernet/hover_net-master/type_info.json --batch_size=16 --model_mode=fast
--model_path=/home/lzh/colon/hovernet/pretrained-model/hovernet_fast_pannuke_type_tf2pytorch.tar --nr_inference_workers=8
--nr_post_proc_workers=8 tile --input_dir=/home/lzh/colon/colon-tiles/id --output_dir=/work/lzh/colon/colon-inference/id
--draw_dot
The text was updated successfully, but these errors were encountered: