NAMESPACE

# Generated by roxygen2: do not edit by hand

export(BatchQC)
export(DE_analyze)
export(EV_plotter)
export(EV_table)
export(PCA_plotter)
export(batch_correct)
export(batch_design)
export(batchqc_explained_variation)
export(bladder_data_upload)
export(color_palette)
export(confound_metrics)
export(cor_props)
export(covariates_not_confounded)
export(cramers_v)
export(dendrogram_alpha_numeric_check)
export(dendrogram_color_palette)
export(dendrogram_plotter)
export(goodness_of_fit_DESeq2)
export(heatmap_num_to_char_converter)
export(heatmap_plotter)
export(normalize_SE)
export(process_dendrogram)
export(pval_plotter)
export(pval_summary)
export(ratio_plotter)
export(std_pearson_corr_coef)
export(summarized_experiment)
export(variation_ratios)
export(volcano_plot)
import(DESeq2)
import(EBSeq)
import(RColorBrewer)
import(SummarizedExperiment)
import(dplyr)
import(ggdendro)
import(ggnewscale)
import(ggplot2)
import(pheatmap)
import(reader)
import(reshape2)
import(scran)
import(shinyjs, except=show)
import(shinythemes)
import(sva)
import(tibble)
import(tidyr)
import(tidyverse)
import(utils)
importFrom(S4Vectors,DataFrame)
importFrom(data.table,data.table)
importFrom(limma,contrasts.fit)
importFrom(limma,eBayes)
importFrom(limma,lmFit)
importFrom(limma,makeContrasts)
importFrom(limma,removeBatchEffect)
importFrom(limma,topTable)
importFrom(stats,aov)
importFrom(stats,as.formula)
importFrom(stats,coef)
importFrom(stats,formula)
importFrom(stats,ks.test)
importFrom(stats,model.matrix)
importFrom(stats,na.omit)
importFrom(stats,pnbinom)
importFrom(stats,t.test)
importFrom(tidyr,pivot_longer)