| layout | title | permalink |
|---|---|---|
page |
Software |
/software/ |
AppEnD tool for mapping 3’ additions from RNA-seq data
https://github.com/jw156605/append
SingleSplice algorithm for detecting alternative splicing in a population of single cells
https://github.com/jw156605/SingleSplice
SLICER (Selective Locally Linear Inference of Cellular Expression Relationships)
https://github.com/jw156605/SLICER
MATCHER (Manifold Alignment to Characterize Experimental Relationships)
https://github.com/jw156605/MATCHER
LIGER (Linked Inference of Genomic Experimental Relationships)
https://github.com/welch-lab/liger
MichiGAN (Sampling from Disentangled Representations of Cell Identity using Generative Adversarial Networks) https://github.com/welch-lab/MichiGAN
SquiggleNet (Real-Time, Direct Classification of Nanopore Signals) https://github.com/welch-lab/SquiggleNet