Singularity definitions

Singularity.from.ghcr.io

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+Bootstrap: docker
+From: ghcr.io/truatpasteurdotfr/model-angelo:main
+
+%runscript
+# do not use ~/.local python
+PYTHONNOUSERSITE=1
+export PYTHONNOUSERSITE
+
+export TORCH_HOME=/public/model_angelo_weights
+
+eval "$(conda shell.bash hook)"
+conda activate model_angelo
+
+#source `which activate` model_angelo
+model_angelo "$@"
+

Singularity.from.scratch

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+Bootstrap: docker
+From: continuumio/miniconda3
+
+%post
+
+conda update conda
+conda upgrade --all -y
+
+# https://github.com/3dem/model-angelo
+cd /opt && \
+git clone https://github.com/3dem/model-angelo.git && \
+export TORCH_HOME=/public/model_angelo_weights && \
+mkdir -p /public/model_angelo_weights && \
+cd model-angelo && \
+bash install_script.sh --download-weights
+
+
+%runscript
+# do not use ~/.local python
+PYTHONNOUSERSITE=1
+export PYTHONNOUSERSITE
+
+export TORCH_HOME=/public/model_angelo_weights
+
+eval "$(conda shell.bash hook)"
+conda activate model_angelo
+
+#source `which activate` model_angelo
+model_angelo "$@"
+